Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
PIF1Q9H611 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PIF1Q9H611 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PIF1Q9H611 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PIF1Q9H611 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PIF1Q9H611 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PIF1Q9H611 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.5■□□□□ 0.07
PIF1Q9H611 MIR648-201ENST00000385046 94 ntBASIC15.5■□□□□ 0.07
PIF1Q9H611 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
PIF1Q9H611 FGFR3P6-201ENST00000457012 610 ntBASIC15.5■□□□□ 0.07
PIF1Q9H611 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.5■□□□□ 0.07
PIF1Q9H611 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.5■□□□□ 0.07
PIF1Q9H611 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.5■□□□□ 0.07
PIF1Q9H611 AC008608.2-201ENST00000606089 416 ntBASIC15.5■□□□□ 0.07
PIF1Q9H611 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.5■□□□□ 0.07
PIF1Q9H611 AC012313.10-201ENST00000623509 926 ntBASIC15.5■□□□□ 0.07
PIF1Q9H611 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PIF1Q9H611 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.5■□□□□ 0.07
PIF1Q9H611 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PIF1Q9H611 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PIF1Q9H611 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PIF1Q9H611 AC016027.1-202ENST00000607927 1699 ntBASIC15.5■□□□□ 0.07
PIF1Q9H611 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PIF1Q9H611 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.5■□□□□ 0.07
PIF1Q9H611 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.5■□□□□ 0.07
PIF1Q9H611 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PIF1Q9H611 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PIF1Q9H611 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PIF1Q9H611 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.49■□□□□ 0.07
PIF1Q9H611 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.49■□□□□ 0.07
PIF1Q9H611 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
PIF1Q9H611 AL592424.1-201ENST00000563624 1536 ntBASIC15.49■□□□□ 0.07
PIF1Q9H611 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.49■□□□□ 0.07
PIF1Q9H611 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PIF1Q9H611 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.49■□□□□ 0.07
PIF1Q9H611 AC004870.1-201ENST00000315132 882 ntBASIC15.49■□□□□ 0.07
PIF1Q9H611 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
PIF1Q9H611 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.49■□□□□ 0.07
PIF1Q9H611 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.49■□□□□ 0.07
PIF1Q9H611 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.49■□□□□ 0.07
PIF1Q9H611 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.49■□□□□ 0.07
PIF1Q9H611 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.49■□□□□ 0.07
PIF1Q9H611 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.49■□□□□ 0.07
PIF1Q9H611 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.49■□□□□ 0.07
PIF1Q9H611 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.49■□□□□ 0.07
PIF1Q9H611 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PIF1Q9H611 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PIF1Q9H611 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PIF1Q9H611 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PIF1Q9H611 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PIF1Q9H611 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
PIF1Q9H611 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PIF1Q9H611 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PIF1Q9H611 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.49■□□□□ 0.07
PIF1Q9H611 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PIF1Q9H611 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.49■□□□□ 0.07
PIF1Q9H611 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PIF1Q9H611 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
PIF1Q9H611 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PIF1Q9H611 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PIF1Q9H611 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PIF1Q9H611 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PIF1Q9H611 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.48■□□□□ 0.07
PIF1Q9H611 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.48■□□□□ 0.07
PIF1Q9H611 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.48■□□□□ 0.07
PIF1Q9H611 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PIF1Q9H611 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PIF1Q9H611 AKR1C7P-201ENST00000305623 895 ntBASIC15.48■□□□□ 0.07
PIF1Q9H611 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.48■□□□□ 0.07
PIF1Q9H611 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PIF1Q9H611 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PIF1Q9H611 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.48■□□□□ 0.07
PIF1Q9H611 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PIF1Q9H611 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PIF1Q9H611 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.48■□□□□ 0.07
PIF1Q9H611 AL805961.1-202ENST00000641562 540 ntBASIC15.48■□□□□ 0.07
PIF1Q9H611 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PIF1Q9H611 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PIF1Q9H611 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.48■□□□□ 0.07
PIF1Q9H611 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PIF1Q9H611 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
PIF1Q9H611 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.48■□□□□ 0.07
PIF1Q9H611 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.48■□□□□ 0.07
PIF1Q9H611 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PIF1Q9H611 PCDHA3-202ENST00000532566 4594 ntBASIC15.48■□□□□ 0.07
PIF1Q9H611 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PIF1Q9H611 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.48■□□□□ 0.07
PIF1Q9H611 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
PIF1Q9H611 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PIF1Q9H611 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PIF1Q9H611 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.48■□□□□ 0.07
PIF1Q9H611 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PIF1Q9H611 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PIF1Q9H611 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PIF1Q9H611 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PIF1Q9H611 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.48■□□□□ 0.07
PIF1Q9H611 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.48■□□□□ 0.07
PIF1Q9H611 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PIF1Q9H611 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
PIF1Q9H611 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms