Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.29■□□□□ 0.2
VPS11Q9H270 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS11Q9H270 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VPS11Q9H270 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS11Q9H270 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VPS11Q9H270 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VPS11Q9H270 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VPS11Q9H270 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VPS11Q9H270 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.28■□□□□ 0.2
VPS11Q9H270 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS11Q9H270 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS11Q9H270 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS11Q9H270 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS11Q9H270 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS11Q9H270 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS11Q9H270 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS11Q9H270 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VPS11Q9H270 RNU1-129P-201ENST00000384064 167 ntBASIC16.28■□□□□ 0.2
VPS11Q9H270 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.28■□□□□ 0.2
VPS11Q9H270 HMGA1P7-201ENST00000406908 502 ntBASIC16.28■□□□□ 0.2
VPS11Q9H270 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS11Q9H270 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.28■□□□□ 0.2
VPS11Q9H270 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.28■□□□□ 0.2
VPS11Q9H270 FAM185BP-201ENST00000443595 716 ntBASIC16.28■□□□□ 0.2
VPS11Q9H270 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS11Q9H270 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VPS11Q9H270 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS11Q9H270 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.28■□□□□ 0.2
VPS11Q9H270 U1.21-201ENST00000580816 167 ntBASIC16.28■□□□□ 0.2
VPS11Q9H270 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS11Q9H270 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS11Q9H270 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.28■□□□□ 0.2
VPS11Q9H270 AL031055.1-201ENST00000606362 631 ntBASIC16.28■□□□□ 0.2
VPS11Q9H270 AC021097.1-201ENST00000607902 574 ntBASIC16.28■□□□□ 0.2
VPS11Q9H270 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.28■□□□□ 0.2
VPS11Q9H270 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS11Q9H270 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS11Q9H270 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.28■□□□□ 0.2
VPS11Q9H270 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
VPS11Q9H270 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS11Q9H270 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS11Q9H270 MIR600HG-201ENST00000449175 5984 ntBASIC16.28■□□□□ 0.2
VPS11Q9H270 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS11Q9H270 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VPS11Q9H270 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS11Q9H270 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS11Q9H270 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS11Q9H270 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS11Q9H270 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS11Q9H270 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.27■□□□□ 0.2
VPS11Q9H270 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
VPS11Q9H270 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.27■□□□□ 0.2
VPS11Q9H270 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.27■□□□□ 0.2
VPS11Q9H270 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS11Q9H270 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.27■□□□□ 0.2
VPS11Q9H270 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
VPS11Q9H270 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS11Q9H270 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS11Q9H270 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.27■□□□□ 0.2
VPS11Q9H270 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS11Q9H270 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.27■□□□□ 0.2
VPS11Q9H270 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS11Q9H270 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS11Q9H270 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS11Q9H270 UNC93B7-201ENST00000509439 705 ntBASIC16.27■□□□□ 0.2
VPS11Q9H270 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.27■□□□□ 0.2
VPS11Q9H270 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.27■□□□□ 0.2
VPS11Q9H270 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.27■□□□□ 0.2
VPS11Q9H270 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS11Q9H270 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.27■□□□□ 0.2
VPS11Q9H270 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
VPS11Q9H270 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS11Q9H270 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS11Q9H270 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VPS11Q9H270 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS11Q9H270 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS11Q9H270 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
VPS11Q9H270 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.27■□□□□ 0.19
VPS11Q9H270 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
VPS11Q9H270 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.27■□□□□ 0.19
VPS11Q9H270 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS11Q9H270 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
VPS11Q9H270 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
VPS11Q9H270 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS11Q9H270 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
VPS11Q9H270 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS11Q9H270 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
VPS11Q9H270 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS11Q9H270 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS11Q9H270 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS11Q9H270 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.26■□□□□ 0.19
VPS11Q9H270 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS11Q9H270 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VPS11Q9H270 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS11Q9H270 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms