Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 AC096734.2-201ENST00000562054 433 ntBASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 AL121912.1-201ENST00000603683 238 ntBASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 FAM215A-202ENST00000632077 792 ntBASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHACTR1Q9C0D0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 AC140658.5-201ENST00000438532 169 ntBASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 PMS2P7-201ENST00000506558 1336 ntBASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 AC138035.3-201ENST00000622706 2791 ntBASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.38■□□□□ 0.21
PHACTR1Q9C0D0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 CICP13-201ENST00000422015 2789 ntBASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 AL450487.1-201ENST00000426799 995 ntBASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 HCG4B-203ENST00000450128 991 ntBASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 EMBP1-201ENST00000458200 901 ntBASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHACTR1Q9C0D0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHACTR1Q9C0D0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PHACTR1Q9C0D0 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHACTR1Q9C0D0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHACTR1Q9C0D0 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PHACTR1Q9C0D0 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.36■□□□□ 0.21
PHACTR1Q9C0D0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.36■□□□□ 0.21
PHACTR1Q9C0D0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.36■□□□□ 0.21
PHACTR1Q9C0D0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHACTR1Q9C0D0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHACTR1Q9C0D0 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PHACTR1Q9C0D0 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHACTR1Q9C0D0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms