Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
LITAFQ99732 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC10.75□□□□□ -0.69
LITAFQ99732 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LITAFQ99732 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
LITAFQ99732 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
LITAFQ99732 OVCH1-AS1-204ENST00000641955 5529 ntBASIC10.74□□□□□ -0.69
LITAFQ99732 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 AL353732.1-201ENST00000569618 1459 ntBASIC10.74□□□□□ -0.69
LITAFQ99732 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 AC067930.6-201ENST00000623257 4947 ntBASIC10.74□□□□□ -0.69
LITAFQ99732 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
LITAFQ99732 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 TKT-201ENST00000296289 1931 ntTSL 5 BASIC10.74□□□□□ -0.69
LITAFQ99732 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 MBLAC2-202ENST00000514906 1936 ntBASIC10.74□□□□□ -0.69
LITAFQ99732 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC10.74□□□□□ -0.69
LITAFQ99732 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC10.74□□□□□ -0.69
LITAFQ99732 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
LITAFQ99732 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC10.74□□□□□ -0.69
LITAFQ99732 CDK2AP2P3-201ENST00000422476 372 ntBASIC10.74□□□□□ -0.69
LITAFQ99732 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC10.74□□□□□ -0.69
LITAFQ99732 AC087163.2-201ENST00000457299 853 ntBASIC10.74□□□□□ -0.69
LITAFQ99732 AC091607.1-201ENST00000490318 1060 ntBASIC10.74□□□□□ -0.69
LITAFQ99732 TMA16-209ENST00000513272 803 ntTSL 2 BASIC10.74□□□□□ -0.69
LITAFQ99732 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 AL160237.2-201ENST00000556165 472 ntBASIC10.74□□□□□ -0.69
LITAFQ99732 AC087641.1-201ENST00000557561 1021 ntBASIC10.74□□□□□ -0.69
LITAFQ99732 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC10.74□□□□□ -0.69
LITAFQ99732 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC10.74□□□□□ -0.69
LITAFQ99732 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC10.74□□□□□ -0.69
LITAFQ99732 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC10.74□□□□□ -0.69
LITAFQ99732 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
LITAFQ99732 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
LITAFQ99732 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
LITAFQ99732 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC10.74□□□□□ -0.69
LITAFQ99732 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC10.74□□□□□ -0.69
LITAFQ99732 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC10.74□□□□□ -0.69
LITAFQ99732 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
LITAFQ99732 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC10.74□□□□□ -0.69
LITAFQ99732 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC10.74□□□□□ -0.69
LITAFQ99732 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LITAFQ99732 REXO1L2P-201ENST00000425429 2069 ntBASIC10.73□□□□□ -0.69
LITAFQ99732 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC10.73□□□□□ -0.69
LITAFQ99732 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC10.73□□□□□ -0.69
LITAFQ99732 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
LITAFQ99732 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC10.73□□□□□ -0.69
LITAFQ99732 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC10.73□□□□□ -0.69
LITAFQ99732 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC10.73□□□□□ -0.69
LITAFQ99732 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
LITAFQ99732 STRN-202ENST00000379213 2254 ntTSL 5 BASIC10.73□□□□□ -0.69
LITAFQ99732 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LITAFQ99732 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
LITAFQ99732 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC10.73□□□□□ -0.69
LITAFQ99732 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms