Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE2Q96FN4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 RNPS1P1-201ENST00000507437 918 ntBASIC14.11□□□□□ -0.15
CPNE2Q96FN4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.11□□□□□ -0.15
CPNE2Q96FN4 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 AL031055.1-201ENST00000606362 631 ntBASIC14.11□□□□□ -0.15
CPNE2Q96FN4 IFNL4P1-201ENST00000607083 540 ntBASIC14.11□□□□□ -0.15
CPNE2Q96FN4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CPNE2Q96FN4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 AC005622.1-201ENST00000636801 1703 ntBASIC14.1□□□□□ -0.15
CPNE2Q96FN4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 PRSS29P-201ENST00000440800 595 ntBASIC14.1□□□□□ -0.15
CPNE2Q96FN4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 AL031432.2-201ENST00000566714 459 ntBASIC14.1□□□□□ -0.15
CPNE2Q96FN4 AL928711.1-201ENST00000570165 459 ntBASIC14.1□□□□□ -0.15
CPNE2Q96FN4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE2Q96FN4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms