Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ECHDC3Q96DC8 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.06■□□□□ 0.16
ECHDC3Q96DC8 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ECHDC3Q96DC8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ECHDC3Q96DC8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ECHDC3Q96DC8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ECHDC3Q96DC8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ECHDC3Q96DC8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ECHDC3Q96DC8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ECHDC3Q96DC8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ECHDC3Q96DC8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ECHDC3Q96DC8 CROCCP1-201ENST00000426910 5675 ntBASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 AC112504.1-201ENST00000623415 1841 ntBASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 TNRC18P3-201ENST00000441896 2691 ntBASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 AC114501.2-201ENST00000439631 535 ntBASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 FAM207CP-201ENST00000443486 507 ntBASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 TSPY16P-201ENST00000449843 468 ntBASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 PHKG1P2-201ENST00000457537 863 ntBASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 SDHAP3-202ENST00000515467 728 ntBASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 AC044860.1-202ENST00000559481 777 ntBASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 AC004840.1-201ENST00000636359 365 ntBASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 AL513523.2-202ENST00000427283 2040 ntBASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 Z97205.2-201ENST00000564697 1639 ntBASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 AC024909.3-201ENST00000611513 2257 ntBASIC16.05■□□□□ 0.16
ECHDC3Q96DC8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 AL450472.2-201ENST00000603663 1156 ntBASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms