Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 AC009090.5-201ENST00000624886 2285 ntBASIC18.19■□□□□ 0.5
TNFRSF25Q93038 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 AL512361.1-201ENST00000554200 418 ntBASIC18.19■□□□□ 0.5
TNFRSF25Q93038 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 AL607033.1-201ENST00000623900 1599 ntBASIC18.19■□□□□ 0.5
TNFRSF25Q93038 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.19■□□□□ 0.5
TNFRSF25Q93038 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.19■□□□□ 0.5
TNFRSF25Q93038 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.18■□□□□ 0.5
TNFRSF25Q93038 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 AL162727.3-201ENST00000635661 2787 ntBASIC18.18■□□□□ 0.5
TNFRSF25Q93038 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 AC107890.1-201ENST00000422478 521 ntBASIC18.18■□□□□ 0.5
TNFRSF25Q93038 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 DUX4L27-201ENST00000554796 1261 ntBASIC18.18■□□□□ 0.5
TNFRSF25Q93038 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 AC073592.8-201ENST00000624126 511 ntBASIC18.18■□□□□ 0.5
TNFRSF25Q93038 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 AP003680.1-201ENST00000598970 3660 ntBASIC18.18■□□□□ 0.5
TNFRSF25Q93038 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 AC105250.1-201ENST00000509378 2057 ntBASIC18.18■□□□□ 0.5
TNFRSF25Q93038 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.18■□□□□ 0.5
TNFRSF25Q93038 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.17■□□□□ 0.5
TNFRSF25Q93038 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 TARDBPP1-201ENST00000442013 1203 ntBASIC18.17■□□□□ 0.5
TNFRSF25Q93038 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.17■□□□□ 0.5
TNFRSF25Q93038 AC097493.3-201ENST00000509725 367 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms