Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 U82695.1-201ENST00000635752 1889 ntBASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 KRT17P6-201ENST00000453795 1220 ntBASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 BX276092.5-203ENST00000456199 560 ntBASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 SLC25A6P2-201ENST00000497974 877 ntBASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 AC013726.1-201ENST00000563747 2285 ntBASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 AGAP7P-201ENST00000582299 2062 ntBASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 AL139424.1-201ENST00000607572 797 ntBASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 AGAP14-201ENST00000624701 2060 ntBASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.79□□□□□ -0.04
CNIH3Q8TBE1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 AC005912.2-201ENST00000619492 2400 ntBASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNIH3Q8TBE1 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms