Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 RN7SL204P-201ENST00000582831 262 ntBASIC18.68■□□□□ 0.58
PNMA1Q8ND90 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 AC004840.1-201ENST00000636359 365 ntBASIC18.68■□□□□ 0.58
PNMA1Q8ND90 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 AC069224.1-201ENST00000566372 1715 ntBASIC18.68■□□□□ 0.58
PNMA1Q8ND90 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 AC236430.1-201ENST00000402231 743 ntBASIC18.67■□□□□ 0.58
PNMA1Q8ND90 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 AC002472.2-201ENST00000442739 958 ntBASIC18.67■□□□□ 0.58
PNMA1Q8ND90 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 MIR3197-201ENST00000582241 73 ntBASIC18.67■□□□□ 0.58
PNMA1Q8ND90 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PNMA1Q8ND90 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 CDC14C-201ENST00000428251 1719 ntBASIC18.66■□□□□ 0.58
PNMA1Q8ND90 BTBD7P1-201ENST00000447253 1453 ntBASIC18.66■□□□□ 0.58
PNMA1Q8ND90 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 FAM207CP-201ENST00000443486 507 ntBASIC18.66■□□□□ 0.58
PNMA1Q8ND90 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.66■□□□□ 0.58
PNMA1Q8ND90 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 SDHAP3-202ENST00000515467 728 ntBASIC18.66■□□□□ 0.58
PNMA1Q8ND90 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 AC025048.3-201ENST00000590609 569 ntBASIC18.66■□□□□ 0.58
PNMA1Q8ND90 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 AC005702.4-201ENST00000618393 416 ntBASIC18.66■□□□□ 0.58
PNMA1Q8ND90 AL109936.8-201ENST00000641772 604 ntBASIC18.66■□□□□ 0.58
PNMA1Q8ND90 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PNMA1Q8ND90 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.65■□□□□ 0.58
PNMA1Q8ND90 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
PNMA1Q8ND90 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms