Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 ADH5P3-201ENST00000433842 1137 ntBASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 AC243562.1-201ENST00000560672 389 ntBASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 AC024267.1-201ENST00000582320 895 ntBASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 LINC02447-202ENST00000501888 2146 ntBASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 HTR5BP-201ENST00000430851 1154 ntBASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 DNAJB3-201ENST00000446806 729 ntBASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 KRT8P23-201ENST00000560090 1207 ntBASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 AC008741.2-201ENST00000612792 3115 ntBASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.79□□□□□ -0.36
TTC9CQ8N5M4 AC112504.1-201ENST00000623415 1841 ntBASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.78□□□□□ -0.36
TTC9CQ8N5M4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms