Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF39Q8N4T4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.16■□□□□ 0.02
ARHGEF39Q8N4T4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF39Q8N4T4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ARHGEF39Q8N4T4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF39Q8N4T4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF39Q8N4T4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF39Q8N4T4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF39Q8N4T4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.16■□□□□ 0.02
ARHGEF39Q8N4T4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF39Q8N4T4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.16■□□□□ 0.02
ARHGEF39Q8N4T4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARHGEF39Q8N4T4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ARHGEF39Q8N4T4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 FAM207CP-201ENST00000443486 507 ntBASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 TSPY16P-201ENST00000449843 468 ntBASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 AL512638.1-201ENST00000457493 794 ntBASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 LINC02447-202ENST00000501888 2146 ntBASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 AC024909.3-201ENST00000611513 2257 ntBASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ARHGEF39Q8N4T4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 AL391005.1-201ENST00000623953 2435 ntBASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 AC074338.1-201ENST00000416825 156 ntBASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 AC136604.1-201ENST00000418535 575 ntBASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 AC002472.2-201ENST00000442739 958 ntBASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 SDHAP3-202ENST00000515467 728 ntBASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 HNRNPUP1-201ENST00000554987 333 ntBASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 MIR4745-201ENST00000577608 62 ntBASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 AC097359.3-201ENST00000603982 1210 ntBASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms