Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 AC027369.6-201ENST00000525520 931 ntBASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 SPCS2P1-201ENST00000561636 679 ntBASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM48Q8IWZ4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 TSPY26P-202ENST00000565928 3884 ntBASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 FLJ38576-201ENST00000623820 2459 ntBASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 FAM8A3P-201ENST00000427218 844 ntBASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 POU5F1P6-201ENST00000466990 990 ntBASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 AL096865.1-201ENST00000606796 927 ntBASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 AC026979.3-201ENST00000607315 403 ntBASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 AC063926.3-201ENST00000624734 5658 ntBASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM48Q8IWZ4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM48Q8IWZ4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms