Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 AC060834.1-201ENST00000443027 2032 ntBASIC15.48■□□□□ 0.07
RAB43Q86YS6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 TSPY16P-201ENST00000449843 468 ntBASIC15.48■□□□□ 0.07
RAB43Q86YS6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 AC013467.2-201ENST00000605472 835 ntBASIC15.48■□□□□ 0.07
RAB43Q86YS6 AC003101.2-201ENST00000612557 442 ntBASIC15.48■□□□□ 0.07
RAB43Q86YS6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
RAB43Q86YS6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB43Q86YS6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RAB43Q86YS6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB43Q86YS6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB43Q86YS6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
RAB43Q86YS6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RAB43Q86YS6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 NORAD-201ENST00000565493 5339 ntBASIC15.47■□□□□ 0.07
RAB43Q86YS6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB43Q86YS6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB43Q86YS6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB43Q86YS6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.47■□□□□ 0.07
RAB43Q86YS6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 HLA-H-201ENST00000383620 1096 ntBASIC15.47■□□□□ 0.07
RAB43Q86YS6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.47■□□□□ 0.07
RAB43Q86YS6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RAB43Q86YS6 FAM207CP-201ENST00000443486 507 ntBASIC15.47■□□□□ 0.07
RAB43Q86YS6 AC097493.3-201ENST00000509725 367 ntBASIC15.47■□□□□ 0.07
RAB43Q86YS6 AP002490.2-201ENST00000524791 560 ntBASIC15.47■□□□□ 0.07
RAB43Q86YS6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.47■□□□□ 0.07
RAB43Q86YS6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.47■□□□□ 0.07
RAB43Q86YS6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.47■□□□□ 0.07
RAB43Q86YS6 AC092068.3-201ENST00000587894 2016 ntBASIC15.47■□□□□ 0.07
RAB43Q86YS6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.47■□□□□ 0.07
RAB43Q86YS6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
RAB43Q86YS6 AC073592.8-201ENST00000624126 511 ntBASIC15.47■□□□□ 0.07
RAB43Q86YS6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAB43Q86YS6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.47■□□□□ 0.07
RAB43Q86YS6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RAB43Q86YS6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB43Q86YS6 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms