Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.43□□□□□ -0.1
LRRC28Q86X40 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.43□□□□□ -0.1
LRRC28Q86X40 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 AL590787.1-201ENST00000568856 1315 ntBASIC14.43□□□□□ -0.1
LRRC28Q86X40 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRC28Q86X40 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
LRRC28Q86X40 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.43□□□□□ -0.1
LRRC28Q86X40 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LRRC28Q86X40 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LRRC28Q86X40 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.43□□□□□ -0.1
LRRC28Q86X40 MIR648-201ENST00000385046 94 ntBASIC14.43□□□□□ -0.1
LRRC28Q86X40 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 AL591424.1-201ENST00000442569 1213 ntBASIC14.43□□□□□ -0.1
LRRC28Q86X40 IGHV3-65-201ENST00000523210 341 ntBASIC14.43□□□□□ -0.1
LRRC28Q86X40 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
LRRC28Q86X40 AC027601.4-201ENST00000611259 610 ntBASIC14.43□□□□□ -0.1
LRRC28Q86X40 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LRRC28Q86X40 GGTLC5P-201ENST00000617623 998 ntBASIC14.43□□□□□ -0.1
LRRC28Q86X40 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LRRC28Q86X40 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.43□□□□□ -0.1
LRRC28Q86X40 AL512652.2-201ENST00000625156 1716 ntBASIC14.43□□□□□ -0.1
LRRC28Q86X40 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.43□□□□□ -0.1
LRRC28Q86X40 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.43□□□□□ -0.1
LRRC28Q86X40 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRC28Q86X40 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 AC138035.3-201ENST00000622706 2791 ntBASIC14.42□□□□□ -0.1
LRRC28Q86X40 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 AC108751.1-201ENST00000490852 363 ntBASIC14.42□□□□□ -0.1
LRRC28Q86X40 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 FAM197Y3-203ENST00000618346 717 ntBASIC14.42□□□□□ -0.1
LRRC28Q86X40 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 AL109954.1-202ENST00000564051 2148 ntBASIC14.42□□□□□ -0.1
LRRC28Q86X40 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRC28Q86X40 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LRRC28Q86X40 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms