Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 AC142381.1-201ENST00000426099 345 ntBASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 GPX1P2-201ENST00000429271 606 ntBASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 SPCS2P4-201ENST00000436160 681 ntBASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 AC027307.2-201ENST00000591252 911 ntBASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 AC026120.1-201ENST00000611536 926 ntBASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 AC112504.1-201ENST00000623415 1841 ntBASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.54□□□□□ -0.08
NHLRC1Q6VVB1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 MIR648-201ENST00000385046 94 ntBASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 AC112482.1-201ENST00000492080 688 ntBASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 AC098859.1-201ENST00000502915 1238 ntBASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 AC079140.1-201ENST00000508039 487 ntBASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NHLRC1Q6VVB1 ELL2P1-201ENST00000413990 1906 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms