Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 FAM215A-202ENST00000632077 792 ntBASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 PCDHA3-202ENST00000532566 4594 ntBASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 AC022532.1-201ENST00000624563 1728 ntBASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 AC108751.1-201ENST00000490852 363 ntBASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 AC148477.8-201ENST00000624298 468 ntBASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.78□□□□□ -0.04
SMARCD3Q6STE5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
SMARCD3Q6STE5 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.77□□□□□ -0.04
SMARCD3Q6STE5 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SMARCD3Q6STE5 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMARCD3Q6STE5 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.77□□□□□ -0.04
SMARCD3Q6STE5 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
SMARCD3Q6STE5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
SMARCD3Q6STE5 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMARCD3Q6STE5 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SMARCD3Q6STE5 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMARCD3Q6STE5 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMARCD3Q6STE5 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMARCD3Q6STE5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 AC092910.1-201ENST00000482027 1129 ntBASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMARCD3Q6STE5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms