Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 KRT18P67-201ENST00000432816 1264 ntBASIC14.18□□□□□ -0.14
C11orf88Q6PI97 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 AC117500.6-201ENST00000624871 588 ntBASIC14.18□□□□□ -0.14
C11orf88Q6PI97 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 FRMD8P1-201ENST00000440433 1524 ntBASIC14.18□□□□□ -0.14
C11orf88Q6PI97 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 FAM45BP-202ENST00000592932 1624 ntBASIC14.18□□□□□ -0.14
C11orf88Q6PI97 AC013268.4-201ENST00000637413 2228 ntBASIC14.18□□□□□ -0.14
C11orf88Q6PI97 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
C11orf88Q6PI97 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.17□□□□□ -0.14
C11orf88Q6PI97 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 TP73-AS1-210ENST00000637775 1455 ntBASIC14.17□□□□□ -0.14
C11orf88Q6PI97 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.17□□□□□ -0.14
C11orf88Q6PI97 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.16□□□□□ -0.14
C11orf88Q6PI97 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C11orf88Q6PI97 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms