Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.12■□□□□ 0.65
CTR9Q6PD62 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CTR9Q6PD62 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTR9Q6PD62 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.12■□□□□ 0.65
CTR9Q6PD62 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.12■□□□□ 0.65
CTR9Q6PD62 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTR9Q6PD62 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTR9Q6PD62 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.12■□□□□ 0.65
CTR9Q6PD62 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.11■□□□□ 0.65
CTR9Q6PD62 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.11■□□□□ 0.65
CTR9Q6PD62 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTR9Q6PD62 PCDH8P1-201ENST00000428983 2773 ntBASIC19.11■□□□□ 0.65
CTR9Q6PD62 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CTR9Q6PD62 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTR9Q6PD62 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.11■□□□□ 0.65
CTR9Q6PD62 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTR9Q6PD62 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTR9Q6PD62 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CTR9Q6PD62 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTR9Q6PD62 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTR9Q6PD62 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.11■□□□□ 0.65
CTR9Q6PD62 RN7SL618P-201ENST00000477850 296 ntBASIC19.11■□□□□ 0.65
CTR9Q6PD62 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CTR9Q6PD62 AC044860.1-202ENST00000559481 777 ntBASIC19.11■□□□□ 0.65
CTR9Q6PD62 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.11■□□□□ 0.65
CTR9Q6PD62 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.11■□□□□ 0.65
CTR9Q6PD62 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.11■□□□□ 0.65
CTR9Q6PD62 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTR9Q6PD62 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTR9Q6PD62 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CTR9Q6PD62 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTR9Q6PD62 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.11■□□□□ 0.65
CTR9Q6PD62 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.11■□□□□ 0.65
CTR9Q6PD62 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTR9Q6PD62 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.11■□□□□ 0.65
CTR9Q6PD62 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTR9Q6PD62 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.11■□□□□ 0.65
CTR9Q6PD62 BNIP3P1-202ENST00000550043 1585 ntBASIC19.1■□□□□ 0.65
CTR9Q6PD62 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CTR9Q6PD62 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTR9Q6PD62 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTR9Q6PD62 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTR9Q6PD62 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTR9Q6PD62 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.1■□□□□ 0.65
CTR9Q6PD62 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.1■□□□□ 0.65
CTR9Q6PD62 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.1■□□□□ 0.65
CTR9Q6PD62 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CTR9Q6PD62 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTR9Q6PD62 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTR9Q6PD62 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CTR9Q6PD62 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTR9Q6PD62 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CTR9Q6PD62 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.1■□□□□ 0.65
CTR9Q6PD62 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CTR9Q6PD62 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTR9Q6PD62 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTR9Q6PD62 SERBP1P3-201ENST00000459980 809 ntBASIC19.1■□□□□ 0.65
CTR9Q6PD62 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.1■□□□□ 0.65
CTR9Q6PD62 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.1■□□□□ 0.65
CTR9Q6PD62 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.1■□□□□ 0.65
CTR9Q6PD62 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CTR9Q6PD62 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTR9Q6PD62 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTR9Q6PD62 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTR9Q6PD62 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTR9Q6PD62 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTR9Q6PD62 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTR9Q6PD62 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CTR9Q6PD62 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTR9Q6PD62 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTR9Q6PD62 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CTR9Q6PD62 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTR9Q6PD62 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CTR9Q6PD62 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTR9Q6PD62 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTR9Q6PD62 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTR9Q6PD62 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CTR9Q6PD62 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTR9Q6PD62 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.09■□□□□ 0.65
CTR9Q6PD62 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTR9Q6PD62 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTR9Q6PD62 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTR9Q6PD62 AL035633.1-201ENST00000406139 838 ntBASIC19.09■□□□□ 0.65
CTR9Q6PD62 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CTR9Q6PD62 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.09■□□□□ 0.65
CTR9Q6PD62 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.09■□□□□ 0.65
CTR9Q6PD62 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTR9Q6PD62 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.09■□□□□ 0.65
CTR9Q6PD62 AC243562.2-201ENST00000561247 970 ntBASIC19.09■□□□□ 0.65
CTR9Q6PD62 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.09■□□□□ 0.65
CTR9Q6PD62 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.09■□□□□ 0.65
CTR9Q6PD62 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTR9Q6PD62 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTR9Q6PD62 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTR9Q6PD62 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CTR9Q6PD62 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.09■□□□□ 0.65
CTR9Q6PD62 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTR9Q6PD62 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.09■□□□□ 0.65
CTR9Q6PD62 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CTR9Q6PD62 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms