Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 LINC00628-201ENST00000628516 1289 ntBASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 AL035456.1-201ENST00000456064 1369 ntBASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 HAUS4P1-201ENST00000406739 1145 ntBASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 FAM58DP-201ENST00000428076 619 ntBASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 HLA-J-203ENST00000494367 1087 ntBASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 AC067863.1-201ENST00000494933 530 ntBASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 AC026150.2-201ENST00000564693 1156 ntBASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 AC027612.4-201ENST00000605371 583 ntBASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 MIR6080-201ENST00000617359 66 ntBASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 FOXO1B-201ENST00000504678 1527 ntBASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC144NLQ6NUI1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC144NLQ6NUI1 AL139010.1-201ENST00000454878 894 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms