Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 AC018529.1-201ENST00000613063 361 ntBASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 MIR6080-201ENST00000617359 66 ntBASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 Z92544.3-201ENST00000624747 417 ntBASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
TTC39BQ5VTQ0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TTC39BQ5VTQ0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
TTC39BQ5VTQ0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
TTC39BQ5VTQ0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TTC39BQ5VTQ0 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TTC39BQ5VTQ0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 RNA5SP410-201ENST00000516285 106 ntBASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 AL365330.1-201ENST00000607459 531 ntBASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TTC39BQ5VTQ0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 NFIC-211ENST00000641145 8399 ntBASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 AC005622.1-201ENST00000636801 1703 ntBASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 AC011270.2-201ENST00000624293 2550 ntBASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 AL353705.2-201ENST00000428243 662 ntBASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms