Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 AL009178.2-201ENST00000597278 2719 ntBASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 AC004461.1-201ENST00000412461 403 ntBASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 AC079140.1-201ENST00000508039 487 ntBASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 AL138918.1-201ENST00000568306 659 ntBASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 AL596442.2-201ENST00000610240 980 ntBASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 AC026120.1-201ENST00000611536 926 ntBASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KHDC1Q4VXA5 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 AKAP8P1-201ENST00000434743 1349 ntBASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 FAM45BP-202ENST00000592932 1624 ntBASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.37■□□□□ 0.21
KHDC1Q4VXA5 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
KHDC1Q4VXA5 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms