Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 AC027307.3-201ENST00000594262 1100 ntBASIC19.35■□□□□ 0.69
RFX7Q2KHR2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 REXO1L1P-202ENST00000608646 1974 ntBASIC19.35■□□□□ 0.69
RFX7Q2KHR2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFX7Q2KHR2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 GNAQP1-201ENST00000444815 1067 ntBASIC19.34■□□□□ 0.69
RFX7Q2KHR2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 HNRNPUP1-201ENST00000554987 333 ntBASIC19.34■□□□□ 0.69
RFX7Q2KHR2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 AL033527.5-202ENST00000641632 1098 ntBASIC19.34■□□□□ 0.69
RFX7Q2KHR2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.34■□□□□ 0.69
RFX7Q2KHR2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFX7Q2KHR2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
RFX7Q2KHR2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFX7Q2KHR2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.33■□□□□ 0.69
RFX7Q2KHR2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.33■□□□□ 0.69
RFX7Q2KHR2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.33■□□□□ 0.69
RFX7Q2KHR2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RFX7Q2KHR2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RFX7Q2KHR2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.33■□□□□ 0.69
RFX7Q2KHR2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.33■□□□□ 0.69
RFX7Q2KHR2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.33■□□□□ 0.69
RFX7Q2KHR2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFX7Q2KHR2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFX7Q2KHR2 CU639417.3-201ENST00000624240 1404 ntBASIC19.33■□□□□ 0.69
RFX7Q2KHR2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.33■□□□□ 0.69
RFX7Q2KHR2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.33■□□□□ 0.69
RFX7Q2KHR2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFX7Q2KHR2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFX7Q2KHR2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.33■□□□□ 0.68
RFX7Q2KHR2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFX7Q2KHR2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RFX7Q2KHR2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RFX7Q2KHR2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.33■□□□□ 0.68
RFX7Q2KHR2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFX7Q2KHR2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 HIST3H2BA-201ENST00000436555 524 ntBASIC19.32■□□□□ 0.68
RFX7Q2KHR2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms