Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEP78395 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEP78395 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEP78395 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
PRAMEP78395 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEP78395 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
PRAMEP78395 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.33■□□□□ 0.21
PRAMEP78395 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEP78395 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.33■□□□□ 0.21
PRAMEP78395 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEP78395 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PRAMEP78395 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.33■□□□□ 0.2
PRAMEP78395 AC105917.1-201ENST00000506637 2539 ntBASIC16.33■□□□□ 0.2
PRAMEP78395 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEP78395 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.33■□□□□ 0.2
PRAMEP78395 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRAMEP78395 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEP78395 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
PRAMEP78395 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.33■□□□□ 0.2
PRAMEP78395 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRAMEP78395 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.33■□□□□ 0.2
PRAMEP78395 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEP78395 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRAMEP78395 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRAMEP78395 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PRAMEP78395 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
PRAMEP78395 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PRAMEP78395 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.32■□□□□ 0.2
PRAMEP78395 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
PRAMEP78395 AL355306.1-201ENST00000415580 579 ntBASIC16.32■□□□□ 0.2
PRAMEP78395 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
PRAMEP78395 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.32■□□□□ 0.2
PRAMEP78395 AL671277.1-201ENST00000429656 993 ntBASIC16.32■□□□□ 0.2
PRAMEP78395 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PRAMEP78395 AKAP8P1-201ENST00000434743 1349 ntBASIC16.32■□□□□ 0.2
PRAMEP78395 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
PRAMEP78395 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
PRAMEP78395 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.32■□□□□ 0.2
PRAMEP78395 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PRAMEP78395 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PRAMEP78395 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
PRAMEP78395 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.32■□□□□ 0.2
PRAMEP78395 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.32■□□□□ 0.2
PRAMEP78395 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.32■□□□□ 0.2
PRAMEP78395 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PRAMEP78395 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.32■□□□□ 0.2
PRAMEP78395 AC023824.1-201ENST00000562945 2975 ntBASIC16.32■□□□□ 0.2
PRAMEP78395 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PRAMEP78395 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEP78395 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
PRAMEP78395 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEP78395 LINC02447-202ENST00000501888 2146 ntBASIC16.31■□□□□ 0.2
PRAMEP78395 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PRAMEP78395 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PRAMEP78395 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms