Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GABREP78334 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.29■□□□□ 0.04
GABREP78334 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.29■□□□□ 0.04
GABREP78334 AC036164.1-201ENST00000570544 333 ntBASIC15.29■□□□□ 0.04
GABREP78334 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.29■□□□□ 0.04
GABREP78334 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.29■□□□□ 0.04
GABREP78334 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.29■□□□□ 0.04
GABREP78334 MIR6787-201ENST00000616675 61 ntBASIC15.29■□□□□ 0.04
GABREP78334 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.29■□□□□ 0.04
GABREP78334 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.29■□□□□ 0.04
GABREP78334 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABREP78334 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GABREP78334 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABREP78334 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GABREP78334 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GABREP78334 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
GABREP78334 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
GABREP78334 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABREP78334 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABREP78334 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GABREP78334 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABREP78334 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
GABREP78334 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.29■□□□□ 0.04
GABREP78334 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABREP78334 AL513477.1-201ENST00000602865 2407 ntBASIC15.28■□□□□ 0.04
GABREP78334 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.28■□□□□ 0.04
GABREP78334 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABREP78334 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
GABREP78334 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABREP78334 AL031731.1-201ENST00000642131 2094 ntBASIC15.28■□□□□ 0.04
GABREP78334 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
GABREP78334 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABREP78334 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GABREP78334 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.28■□□□□ 0.04
GABREP78334 BRWD1P1-201ENST00000401091 371 ntBASIC15.28■□□□□ 0.04
GABREP78334 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.28■□□□□ 0.04
GABREP78334 AL162726.2-201ENST00000438986 1017 ntBASIC15.28■□□□□ 0.04
GABREP78334 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.28■□□□□ 0.04
GABREP78334 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.28■□□□□ 0.04
GABREP78334 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABREP78334 SLC25A47P1-201ENST00000531577 414 ntBASIC15.28■□□□□ 0.04
GABREP78334 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.28■□□□□ 0.04
GABREP78334 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.28■□□□□ 0.04
GABREP78334 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.28■□□□□ 0.04
GABREP78334 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABREP78334 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABREP78334 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABREP78334 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABREP78334 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GABREP78334 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.28■□□□□ 0.04
GABREP78334 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.28■□□□□ 0.04
GABREP78334 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABREP78334 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.28■□□□□ 0.04
GABREP78334 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABREP78334 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
GABREP78334 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.28■□□□□ 0.04
GABREP78334 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.28■□□□□ 0.04
GABREP78334 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GABREP78334 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABREP78334 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABREP78334 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
GABREP78334 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABREP78334 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABREP78334 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABREP78334 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
GABREP78334 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.27■□□□□ 0.04
GABREP78334 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
GABREP78334 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.27■□□□□ 0.04
GABREP78334 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABREP78334 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GABREP78334 KRT8P22-201ENST00000562317 1415 ntBASIC15.27■□□□□ 0.04
GABREP78334 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABREP78334 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
GABREP78334 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GABREP78334 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
GABREP78334 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GABREP78334 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABREP78334 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.27■□□□□ 0.04
GABREP78334 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABREP78334 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.27■□□□□ 0.04
GABREP78334 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABREP78334 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABREP78334 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABREP78334 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.27■□□□□ 0.04
GABREP78334 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
GABREP78334 RN7SL399P-201ENST00000471648 279 ntBASIC15.27■□□□□ 0.04
GABREP78334 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
GABREP78334 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.27■□□□□ 0.04
GABREP78334 AL583810.1-201ENST00000553344 1045 ntBASIC15.27■□□□□ 0.04
GABREP78334 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.27■□□□□ 0.04
GABREP78334 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.27■□□□□ 0.04
GABREP78334 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.27■□□□□ 0.04
GABREP78334 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABREP78334 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.27■□□□□ 0.04
GABREP78334 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.27■□□□□ 0.04
GABREP78334 CU634019.7-201ENST00000624153 1185 ntBASIC15.27■□□□□ 0.04
GABREP78334 FP236241.2-201ENST00000624906 1185 ntBASIC15.27■□□□□ 0.04
GABREP78334 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GABREP78334 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GABREP78334 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms