Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
UBA52P62987 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 OR2I1P-209ENST00000641730 5365 ntBASIC14.03□□□□□ -0.16
UBA52P62987 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
UBA52P62987 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UBA52P62987 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBA52P62987 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBA52P62987 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBA52P62987 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
UBA52P62987 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.02□□□□□ -0.16
UBA52P62987 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.02□□□□□ -0.16
UBA52P62987 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
UBA52P62987 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
UBA52P62987 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
UBA52P62987 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.02□□□□□ -0.16
UBA52P62987 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBA52P62987 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
UBA52P62987 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBA52P62987 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.02□□□□□ -0.17
UBA52P62987 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBA52P62987 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
UBA52P62987 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.02□□□□□ -0.17
UBA52P62987 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBA52P62987 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.02□□□□□ -0.17
UBA52P62987 PRSS29P-201ENST00000440800 595 ntBASIC14.02□□□□□ -0.17
UBA52P62987 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.02□□□□□ -0.17
UBA52P62987 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.02□□□□□ -0.17
UBA52P62987 AC018845.2-201ENST00000568326 409 ntBASIC14.02□□□□□ -0.17
UBA52P62987 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.02□□□□□ -0.17
UBA52P62987 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.02□□□□□ -0.17
UBA52P62987 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.02□□□□□ -0.17
UBA52P62987 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.02□□□□□ -0.17
UBA52P62987 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.02□□□□□ -0.17
UBA52P62987 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
UBA52P62987 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
UBA52P62987 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
UBA52P62987 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.02□□□□□ -0.17
UBA52P62987 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBA52P62987 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBA52P62987 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
UBA52P62987 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBA52P62987 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.01□□□□□ -0.17
UBA52P62987 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.01□□□□□ -0.17
UBA52P62987 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
UBA52P62987 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.01□□□□□ -0.17
UBA52P62987 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.01□□□□□ -0.17
UBA52P62987 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 AL353593.2-201ENST00000602529 1483 ntBASIC14.01□□□□□ -0.17
UBA52P62987 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
UBA52P62987 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
UBA52P62987 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
UBA52P62987 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.01□□□□□ -0.17
UBA52P62987 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.01□□□□□ -0.17
UBA52P62987 KLF4P1-201ENST00000412782 1185 ntBASIC14.01□□□□□ -0.17
UBA52P62987 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
UBA52P62987 CNN2P11-201ENST00000429351 262 ntBASIC14.01□□□□□ -0.17
UBA52P62987 HTR5BP-201ENST00000430851 1154 ntBASIC14.01□□□□□ -0.17
UBA52P62987 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
UBA52P62987 HCG4B-203ENST00000450128 991 ntBASIC14.01□□□□□ -0.17
UBA52P62987 CYMP-203ENST00000474680 1263 ntBASIC14.01□□□□□ -0.17
UBA52P62987 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 RPS15P9-201ENST00000494093 319 ntBASIC14.01□□□□□ -0.17
UBA52P62987 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.01□□□□□ -0.17
UBA52P62987 IGHV3-65-201ENST00000523210 341 ntBASIC14.01□□□□□ -0.17
UBA52P62987 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.01□□□□□ -0.17
UBA52P62987 RFPL4AP1-201ENST00000530883 850 ntBASIC14.01□□□□□ -0.17
UBA52P62987 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.01□□□□□ -0.17
UBA52P62987 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
UBA52P62987 AC008667.4-201ENST00000607370 168 ntBASIC14.01□□□□□ -0.17
UBA52P62987 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.01□□□□□ -0.17
UBA52P62987 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.01□□□□□ -0.17
UBA52P62987 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.01□□□□□ -0.17
UBA52P62987 AL161772.1-201ENST00000610494 4412 ntBASIC14.01□□□□□ -0.17
UBA52P62987 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
UBA52P62987 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.01□□□□□ -0.17
UBA52P62987 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.01□□□□□ -0.17
UBA52P62987 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBA52P62987 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14□□□□□ -0.17
UBA52P62987 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14□□□□□ -0.17
UBA52P62987 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14□□□□□ -0.17
UBA52P62987 AL596087.1-201ENST00000400979 1969 ntBASIC14□□□□□ -0.17
UBA52P62987 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms