Protein–RNA interactions for Protein: P52848

NDST1, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST1P52848 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDST1P52848 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.1■□□□□ 0.33
NDST1P52848 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NDST1P52848 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.1■□□□□ 0.33
NDST1P52848 AL355385.1-201ENST00000606123 409 ntBASIC17.1■□□□□ 0.33
NDST1P52848 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NDST1P52848 KRT8P37-201ENST00000451609 1420 ntBASIC17.1■□□□□ 0.33
NDST1P52848 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDST1P52848 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDST1P52848 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
NDST1P52848 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDST1P52848 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NDST1P52848 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDST1P52848 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.1■□□□□ 0.33
NDST1P52848 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDST1P52848 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDST1P52848 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.1■□□□□ 0.33
NDST1P52848 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NDST1P52848 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.1■□□□□ 0.33
NDST1P52848 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.1■□□□□ 0.33
NDST1P52848 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDST1P52848 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.1■□□□□ 0.33
NDST1P52848 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDST1P52848 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDST1P52848 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.09■□□□□ 0.33
NDST1P52848 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDST1P52848 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDST1P52848 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDST1P52848 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.09■□□□□ 0.33
NDST1P52848 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDST1P52848 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDST1P52848 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NDST1P52848 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.09■□□□□ 0.33
NDST1P52848 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.09■□□□□ 0.33
NDST1P52848 MIR770-201ENST00000390219 98 ntBASIC17.09■□□□□ 0.33
NDST1P52848 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.09■□□□□ 0.33
NDST1P52848 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.09■□□□□ 0.33
NDST1P52848 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.09■□□□□ 0.33
NDST1P52848 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NDST1P52848 AC093214.1-201ENST00000511688 1107 ntBASIC17.09■□□□□ 0.33
NDST1P52848 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.09■□□□□ 0.33
NDST1P52848 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.09■□□□□ 0.33
NDST1P52848 AL590560.3-201ENST00000623350 461 ntBASIC17.09■□□□□ 0.33
NDST1P52848 AC100757.3-201ENST00000622361 1406 ntBASIC17.09■□□□□ 0.33
NDST1P52848 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDST1P52848 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDST1P52848 AC112504.1-201ENST00000623415 1841 ntBASIC17.09■□□□□ 0.33
NDST1P52848 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.09■□□□□ 0.33
NDST1P52848 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NDST1P52848 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.09■□□□□ 0.33
NDST1P52848 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDST1P52848 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDST1P52848 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDST1P52848 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NDST1P52848 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDST1P52848 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.09■□□□□ 0.33
NDST1P52848 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.09■□□□□ 0.33
NDST1P52848 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDST1P52848 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDST1P52848 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDST1P52848 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.08■□□□□ 0.33
NDST1P52848 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDST1P52848 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
NDST1P52848 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
NDST1P52848 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
NDST1P52848 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDST1P52848 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDST1P52848 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.08■□□□□ 0.33
NDST1P52848 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.08■□□□□ 0.33
NDST1P52848 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDST1P52848 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDST1P52848 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDST1P52848 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDST1P52848 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDST1P52848 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDST1P52848 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDST1P52848 AC241585.1-201ENST00000433527 519 ntBASIC17.08■□□□□ 0.32
NDST1P52848 EEF1DP4-201ENST00000446006 880 ntBASIC17.08■□□□□ 0.32
NDST1P52848 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.08■□□□□ 0.32
NDST1P52848 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.08■□□□□ 0.32
NDST1P52848 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.08■□□□□ 0.32
NDST1P52848 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDST1P52848 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.08■□□□□ 0.32
NDST1P52848 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.08■□□□□ 0.32
NDST1P52848 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.08■□□□□ 0.32
NDST1P52848 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
NDST1P52848 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDST1P52848 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDST1P52848 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDST1P52848 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDST1P52848 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NDST1P52848 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDST1P52848 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDST1P52848 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDST1P52848 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
NDST1P52848 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDST1P52848 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDST1P52848 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDST1P52848 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.07■□□□□ 0.32
NDST1P52848 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms