Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.69■□□□□ 0.42
BRCA2P51587 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCA2P51587 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.69■□□□□ 0.42
BRCA2P51587 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
BRCA2P51587 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCA2P51587 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCA2P51587 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
BRCA2P51587 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.69■□□□□ 0.42
BRCA2P51587 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCA2P51587 AL023775.1-201ENST00000454907 1746 ntBASIC17.69■□□□□ 0.42
BRCA2P51587 DRD5P1-201ENST00000456605 1438 ntBASIC17.69■□□□□ 0.42
BRCA2P51587 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.69■□□□□ 0.42
BRCA2P51587 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCA2P51587 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.69■□□□□ 0.42
BRCA2P51587 AZGP1P1-201ENST00000411909 902 ntBASIC17.69■□□□□ 0.42
BRCA2P51587 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.69■□□□□ 0.42
BRCA2P51587 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.69■□□□□ 0.42
BRCA2P51587 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.69■□□□□ 0.42
BRCA2P51587 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.69■□□□□ 0.42
BRCA2P51587 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 HLA-A-202ENST00000376806 1854 ntBASIC17.68■□□□□ 0.42
BRCA2P51587 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.68■□□□□ 0.42
BRCA2P51587 ACTG1P2-201ENST00000415776 1125 ntBASIC17.68■□□□□ 0.42
BRCA2P51587 ACTG1P11-201ENST00000425411 1125 ntBASIC17.68■□□□□ 0.42
BRCA2P51587 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.68■□□□□ 0.42
BRCA2P51587 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.68■□□□□ 0.42
BRCA2P51587 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.68■□□□□ 0.42
BRCA2P51587 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.68■□□□□ 0.42
BRCA2P51587 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.68■□□□□ 0.42
BRCA2P51587 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17.68■□□□□ 0.42
BRCA2P51587 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.68■□□□□ 0.42
BRCA2P51587 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.68■□□□□ 0.42
BRCA2P51587 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.68■□□□□ 0.42
BRCA2P51587 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
BRCA2P51587 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.68■□□□□ 0.42
BRCA2P51587 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC17.68■□□□□ 0.42
BRCA2P51587 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 AC026410.3-201ENST00000514280 936 ntBASIC17.68■□□□□ 0.42
BRCA2P51587 AC126915.1-201ENST00000522847 1038 ntBASIC17.68■□□□□ 0.42
BRCA2P51587 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.68■□□□□ 0.42
BRCA2P51587 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.68■□□□□ 0.42
BRCA2P51587 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
BRCA2P51587 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
BRCA2P51587 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.68■□□□□ 0.42
BRCA2P51587 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.68■□□□□ 0.42
BRCA2P51587 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.68■□□□□ 0.42
BRCA2P51587 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.68■□□□□ 0.42
BRCA2P51587 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.68■□□□□ 0.42
BRCA2P51587 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.68■□□□□ 0.42
BRCA2P51587 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.68■□□□□ 0.42
BRCA2P51587 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BRCA2P51587 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
BRCA2P51587 PCGF3-213ENST00000620529 1899 ntBASIC17.67■□□□□ 0.42
BRCA2P51587 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCA2P51587 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.67■□□□□ 0.42
BRCA2P51587 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.67■□□□□ 0.42
BRCA2P51587 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BRCA2P51587 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BRCA2P51587 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BRCA2P51587 AC023310.1-201ENST00000554836 735 ntBASIC17.67■□□□□ 0.42
BRCA2P51587 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.67■□□□□ 0.42
BRCA2P51587 YRDCP1-201ENST00000621419 643 ntBASIC17.67■□□□□ 0.42
BRCA2P51587 CASP16P-204ENST00000635032 809 ntBASIC17.67■□□□□ 0.42
BRCA2P51587 AC006453.4-201ENST00000636949 1252 ntBASIC17.67■□□□□ 0.42
BRCA2P51587 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCA2P51587 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCA2P51587 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
BRCA2P51587 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCA2P51587 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BRCA2P51587 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.67■□□□□ 0.42
BRCA2P51587 NUP210P1-202ENST00000504322 710 ntBASIC17.67■□□□□ 0.42
BRCA2P51587 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BRCA2P51587 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
BRCA2P51587 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
BRCA2P51587 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCA2P51587 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCA2P51587 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCA2P51587 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.67■□□□□ 0.42
BRCA2P51587 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
BRCA2P51587 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BRCA2P51587 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BRCA2P51587 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.67■□□□□ 0.42
BRCA2P51587 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms