Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
ARCN1P48444 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.16■□□□□ 0.18
ARCN1P48444 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ARCN1P48444 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ARCN1P48444 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.16■□□□□ 0.18
ARCN1P48444 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ARCN1P48444 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ARCN1P48444 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.16■□□□□ 0.18
ARCN1P48444 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ARCN1P48444 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.16■□□□□ 0.18
ARCN1P48444 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ARCN1P48444 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ARCN1P48444 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ARCN1P48444 SPCS2P4-201ENST00000436160 681 ntBASIC16.16■□□□□ 0.18
ARCN1P48444 ACTG1P14-201ENST00000446382 1122 ntBASIC16.16■□□□□ 0.18
ARCN1P48444 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ARCN1P48444 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.16■□□□□ 0.18
ARCN1P48444 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.16■□□□□ 0.18
ARCN1P48444 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.16■□□□□ 0.18
ARCN1P48444 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.16■□□□□ 0.18
ARCN1P48444 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ARCN1P48444 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ARCN1P48444 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ARCN1P48444 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ARCN1P48444 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ARCN1P48444 AC134407.2-201ENST00000625089 1978 ntBASIC16.16■□□□□ 0.18
ARCN1P48444 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ARCN1P48444 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.16■□□□□ 0.18
ARCN1P48444 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ARCN1P48444 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.16■□□□□ 0.18
ARCN1P48444 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ARCN1P48444 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ARCN1P48444 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ARCN1P48444 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
ARCN1P48444 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ARCN1P48444 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ARCN1P48444 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
ARCN1P48444 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.16■□□□□ 0.18
ARCN1P48444 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.15■□□□□ 0.18
ARCN1P48444 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.15■□□□□ 0.18
ARCN1P48444 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ARCN1P48444 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARCN1P48444 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.15■□□□□ 0.18
ARCN1P48444 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ARCN1P48444 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.15■□□□□ 0.18
ARCN1P48444 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.15■□□□□ 0.18
ARCN1P48444 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
ARCN1P48444 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARCN1P48444 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARCN1P48444 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARCN1P48444 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARCN1P48444 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARCN1P48444 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.15■□□□□ 0.18
ARCN1P48444 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARCN1P48444 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ARCN1P48444 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ARCN1P48444 AC004461.1-201ENST00000412461 403 ntBASIC16.15■□□□□ 0.18
ARCN1P48444 AC254562.1-201ENST00000417586 456 ntBASIC16.15■□□□□ 0.18
ARCN1P48444 SPDYE11-202ENST00000450699 704 ntBASIC16.15■□□□□ 0.18
ARCN1P48444 RN7SL589P-201ENST00000481268 310 ntBASIC16.15■□□□□ 0.18
ARCN1P48444 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.15■□□□□ 0.18
ARCN1P48444 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.15■□□□□ 0.18
ARCN1P48444 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.15■□□□□ 0.18
ARCN1P48444 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.15■□□□□ 0.18
ARCN1P48444 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ARCN1P48444 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
ARCN1P48444 SPDYE9P-201ENST00000570642 692 ntBASIC16.15■□□□□ 0.18
ARCN1P48444 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.15■□□□□ 0.18
ARCN1P48444 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.15■□□□□ 0.18
ARCN1P48444 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ARCN1P48444 SPDYE10P-202ENST00000612005 668 ntBASIC16.15■□□□□ 0.18
ARCN1P48444 SPDYE8P-202ENST00000612377 668 ntBASIC16.15■□□□□ 0.18
ARCN1P48444 AC105339.1-204ENST00000636249 355 ntBASIC16.15■□□□□ 0.18
ARCN1P48444 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARCN1P48444 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.15■□□□□ 0.18
ARCN1P48444 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARCN1P48444 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
ARCN1P48444 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARCN1P48444 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARCN1P48444 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.15■□□□□ 0.18
ARCN1P48444 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ARCN1P48444 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARCN1P48444 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARCN1P48444 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
ARCN1P48444 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
ARCN1P48444 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
ARCN1P48444 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ARCN1P48444 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARCN1P48444 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARCN1P48444 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.14■□□□□ 0.17
ARCN1P48444 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARCN1P48444 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARCN1P48444 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARCN1P48444 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ARCN1P48444 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.14■□□□□ 0.17
ARCN1P48444 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARCN1P48444 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARCN1P48444 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.14■□□□□ 0.17
ARCN1P48444 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.14■□□□□ 0.17
ARCN1P48444 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms