Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CHRNA3P32297 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.05■□□□□ 0.32
CHRNA3P32297 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.05■□□□□ 0.32
CHRNA3P32297 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.05■□□□□ 0.32
CHRNA3P32297 AC140658.5-201ENST00000438532 169 ntBASIC17.05■□□□□ 0.32
CHRNA3P32297 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.05■□□□□ 0.32
CHRNA3P32297 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CHRNA3P32297 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.05■□□□□ 0.32
CHRNA3P32297 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.05■□□□□ 0.32
CHRNA3P32297 SNHG9-202ENST00000564014 471 ntBASIC17.05■□□□□ 0.32
CHRNA3P32297 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CHRNA3P32297 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CHRNA3P32297 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.05■□□□□ 0.32
CHRNA3P32297 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CHRNA3P32297 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CHRNA3P32297 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CHRNA3P32297 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CHRNA3P32297 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.05■□□□□ 0.32
CHRNA3P32297 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
CHRNA3P32297 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.04■□□□□ 0.32
CHRNA3P32297 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA3P32297 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA3P32297 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA3P32297 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA3P32297 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CHRNA3P32297 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRNA3P32297 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA3P32297 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
CHRNA3P32297 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA3P32297 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA3P32297 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA3P32297 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA3P32297 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.04■□□□□ 0.32
CHRNA3P32297 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA3P32297 AC002056.1-201ENST00000395613 760 ntBASIC17.04■□□□□ 0.32
CHRNA3P32297 AC254562.1-201ENST00000417586 456 ntBASIC17.04■□□□□ 0.32
CHRNA3P32297 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA3P32297 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CHRNA3P32297 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.04■□□□□ 0.32
CHRNA3P32297 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.04■□□□□ 0.32
CHRNA3P32297 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRNA3P32297 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRNA3P32297 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA3P32297 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA3P32297 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA3P32297 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRNA3P32297 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA3P32297 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA3P32297 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CHRNA3P32297 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.04■□□□□ 0.32
CHRNA3P32297 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.04■□□□□ 0.32
CHRNA3P32297 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA3P32297 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA3P32297 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHRNA3P32297 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA3P32297 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA3P32297 U82695.1-201ENST00000635752 1889 ntBASIC17.03■□□□□ 0.32
CHRNA3P32297 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CHRNA3P32297 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHRNA3P32297 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA3P32297 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRNA3P32297 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA3P32297 AC023824.1-201ENST00000562945 2975 ntBASIC17.03■□□□□ 0.32
CHRNA3P32297 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA3P32297 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA3P32297 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CHRNA3P32297 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
CHRNA3P32297 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA3P32297 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA3P32297 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.03■□□□□ 0.32
CHRNA3P32297 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA3P32297 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA3P32297 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.03■□□□□ 0.32
CHRNA3P32297 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.03■□□□□ 0.32
CHRNA3P32297 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA3P32297 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA3P32297 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA3P32297 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA3P32297 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA3P32297 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA3P32297 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CHRNA3P32297 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA3P32297 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
CHRNA3P32297 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA3P32297 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms