Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC103702.1-201ENST00000548801 2630 ntBASIC13.85□□□□□ -0.19
TNFSF4P23510 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
TNFSF4P23510 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
TNFSF4P23510 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.85□□□□□ -0.19
TNFSF4P23510 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TNFSF4P23510 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.85□□□□□ -0.19
TNFSF4P23510 AP3S2-216ENST00000617003 1561 ntBASIC13.85□□□□□ -0.19
TNFSF4P23510 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.85□□□□□ -0.19
TNFSF4P23510 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TNFSF4P23510 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.85□□□□□ -0.19
TNFSF4P23510 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.85□□□□□ -0.19
TNFSF4P23510 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.85□□□□□ -0.19
TNFSF4P23510 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.85□□□□□ -0.19
TNFSF4P23510 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.85□□□□□ -0.19
TNFSF4P23510 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TNFSF4P23510 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.85□□□□□ -0.19
TNFSF4P23510 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.85□□□□□ -0.19
TNFSF4P23510 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.85□□□□□ -0.19
TNFSF4P23510 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.85□□□□□ -0.19
TNFSF4P23510 AL512356.2-201ENST00000546955 174 ntBASIC13.85□□□□□ -0.19
TNFSF4P23510 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TNFSF4P23510 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TNFSF4P23510 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.85□□□□□ -0.19
TNFSF4P23510 AC026150.2-201ENST00000564693 1156 ntBASIC13.85□□□□□ -0.19
TNFSF4P23510 AC003101.2-201ENST00000612557 442 ntBASIC13.85□□□□□ -0.19
TNFSF4P23510 AC018529.1-201ENST00000613063 361 ntBASIC13.85□□□□□ -0.19
TNFSF4P23510 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.85□□□□□ -0.19
TNFSF4P23510 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.85□□□□□ -0.19
TNFSF4P23510 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.85□□□□□ -0.19
TNFSF4P23510 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.85□□□□□ -0.19
TNFSF4P23510 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TNFSF4P23510 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TNFSF4P23510 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TNFSF4P23510 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.85□□□□□ -0.19
TNFSF4P23510 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.85□□□□□ -0.19
TNFSF4P23510 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
TNFSF4P23510 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TNFSF4P23510 AL592424.1-201ENST00000563624 1536 ntBASIC13.85□□□□□ -0.19
TNFSF4P23510 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.84□□□□□ -0.19
TNFSF4P23510 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.84□□□□□ -0.19
TNFSF4P23510 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TNFSF4P23510 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.84□□□□□ -0.19
TNFSF4P23510 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.84□□□□□ -0.19
TNFSF4P23510 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.84□□□□□ -0.19
TNFSF4P23510 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
TNFSF4P23510 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.84□□□□□ -0.19
TNFSF4P23510 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.84□□□□□ -0.19
TNFSF4P23510 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.84□□□□□ -0.19
TNFSF4P23510 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.84□□□□□ -0.19
TNFSF4P23510 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.84□□□□□ -0.19
TNFSF4P23510 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TNFSF4P23510 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
TNFSF4P23510 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.84□□□□□ -0.19
TNFSF4P23510 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TNFSF4P23510 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.83□□□□□ -0.19
TNFSF4P23510 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TNFSF4P23510 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.83□□□□□ -0.19
TNFSF4P23510 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms