Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
XPAP23025 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
XPAP23025 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
XPAP23025 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
XPAP23025 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.29■□□□□ 0.2
XPAP23025 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
XPAP23025 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
XPAP23025 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.29■□□□□ 0.2
XPAP23025 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
XPAP23025 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
XPAP23025 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
XPAP23025 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
XPAP23025 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.29■□□□□ 0.2
XPAP23025 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.29■□□□□ 0.2
XPAP23025 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XPAP23025 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.28■□□□□ 0.2
XPAP23025 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
XPAP23025 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
XPAP23025 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XPAP23025 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XPAP23025 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
XPAP23025 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XPAP23025 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XPAP23025 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XPAP23025 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XPAP23025 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.28■□□□□ 0.2
XPAP23025 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.28■□□□□ 0.2
XPAP23025 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
XPAP23025 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.28■□□□□ 0.2
XPAP23025 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.28■□□□□ 0.2
XPAP23025 SPDYE12P-201ENST00000618416 771 ntBASIC16.28■□□□□ 0.2
XPAP23025 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
XPAP23025 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
XPAP23025 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
XPAP23025 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XPAP23025 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XPAP23025 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
XPAP23025 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
XPAP23025 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
XPAP23025 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
XPAP23025 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
XPAP23025 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XPAP23025 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
XPAP23025 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
XPAP23025 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
XPAP23025 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
XPAP23025 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
XPAP23025 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
XPAP23025 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.27■□□□□ 0.2
XPAP23025 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
XPAP23025 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.27■□□□□ 0.2
XPAP23025 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
XPAP23025 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
XPAP23025 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.27■□□□□ 0.2
XPAP23025 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
XPAP23025 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
XPAP23025 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
XPAP23025 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
XPAP23025 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
XPAP23025 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
XPAP23025 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
XPAP23025 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.27■□□□□ 0.2
XPAP23025 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
XPAP23025 AC241585.1-201ENST00000433527 519 ntBASIC16.27■□□□□ 0.2
XPAP23025 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
XPAP23025 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.27■□□□□ 0.2
XPAP23025 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.27■□□□□ 0.2
XPAP23025 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.27■□□□□ 0.2
XPAP23025 HLA-V-204ENST00000476601 1289 ntBASIC16.27■□□□□ 0.2
XPAP23025 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.27■□□□□ 0.2
XPAP23025 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.27■□□□□ 0.2
XPAP23025 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.27■□□□□ 0.2
XPAP23025 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.27■□□□□ 0.2
XPAP23025 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.27■□□□□ 0.2
XPAP23025 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
XPAP23025 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
XPAP23025 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
XPAP23025 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
XPAP23025 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.27■□□□□ 0.19
XPAP23025 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
XPAP23025 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
XPAP23025 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.27■□□□□ 0.19
XPAP23025 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
XPAP23025 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
XPAP23025 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
XPAP23025 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
XPAP23025 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.27■□□□□ 0.19
XPAP23025 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
XPAP23025 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
XPAP23025 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
XPAP23025 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
XPAP23025 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
XPAP23025 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.26■□□□□ 0.19
XPAP23025 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
XPAP23025 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.26■□□□□ 0.19
XPAP23025 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.26■□□□□ 0.19
XPAP23025 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
XPAP23025 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
XPAP23025 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.26■□□□□ 0.19
XPAP23025 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms