Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFRSF1BP20333 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.03■□□□□ -0
TNFRSF1BP20333 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.03■□□□□ -0
TNFRSF1BP20333 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.03■□□□□ -0
TNFRSF1BP20333 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.03■□□□□ -0
TNFRSF1BP20333 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TNFRSF1BP20333 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.03■□□□□ -0
TNFRSF1BP20333 PRSS29P-201ENST00000440800 595 ntBASIC15.03■□□□□ -0
TNFRSF1BP20333 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.03■□□□□ -0
TNFRSF1BP20333 AP002469.2-201ENST00000531724 424 ntBASIC15.03■□□□□ -0
TNFRSF1BP20333 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.03■□□□□ -0
TNFRSF1BP20333 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.03■□□□□ -0
TNFRSF1BP20333 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFRSF1BP20333 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFRSF1BP20333 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
TNFRSF1BP20333 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TNFRSF1BP20333 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.03■□□□□ -0
TNFRSF1BP20333 AL136379.1-201ENST00000623471 2642 ntBASIC15.03■□□□□ -0
TNFRSF1BP20333 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFRSF1BP20333 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TNFRSF1BP20333 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TNFRSF1BP20333 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TNFRSF1BP20333 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFRSF1BP20333 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFRSF1BP20333 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TNFRSF1BP20333 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.03■□□□□ -0
TNFRSF1BP20333 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFRSF1BP20333 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.02■□□□□ -0
TNFRSF1BP20333 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.02■□□□□ -0
TNFRSF1BP20333 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
TNFRSF1BP20333 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.02■□□□□ -0
TNFRSF1BP20333 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TNFRSF1BP20333 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TNFRSF1BP20333 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.02■□□□□ -0
TNFRSF1BP20333 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.02■□□□□ -0
TNFRSF1BP20333 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.02■□□□□ -0
TNFRSF1BP20333 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
TNFRSF1BP20333 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TNFRSF1BP20333 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.02■□□□□ -0
TNFRSF1BP20333 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
TNFRSF1BP20333 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.02■□□□□ -0
TNFRSF1BP20333 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
TNFRSF1BP20333 AC092127.1-201ENST00000567093 3455 ntBASIC15.02■□□□□ -0
TNFRSF1BP20333 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TNFRSF1BP20333 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.02■□□□□ -0
TNFRSF1BP20333 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TNFRSF1BP20333 RPS2P28-201ENST00000314255 741 ntBASIC15.02■□□□□ -0
TNFRSF1BP20333 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.02■□□□□ -0
TNFRSF1BP20333 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.02■□□□□ -0
TNFRSF1BP20333 VN2R19P-201ENST00000442399 1052 ntBASIC15.02■□□□□ -0
TNFRSF1BP20333 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.02■□□□□ -0
TNFRSF1BP20333 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.02■□□□□ -0
TNFRSF1BP20333 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.02■□□□□ -0
TNFRSF1BP20333 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.02■□□□□ -0
TNFRSF1BP20333 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.02■□□□□ -0
TNFRSF1BP20333 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.02■□□□□ -0
TNFRSF1BP20333 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.02■□□□□ -0
TNFRSF1BP20333 MIR3909-201ENST00000579518 119 ntBASIC15.02■□□□□ -0
TNFRSF1BP20333 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.02■□□□□ -0
TNFRSF1BP20333 AC010507.1-201ENST00000633895 436 ntBASIC15.02■□□□□ -0
TNFRSF1BP20333 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TNFRSF1BP20333 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TNFRSF1BP20333 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.02□□□□□ -0.01
TNFRSF1BP20333 AC023157.3-201ENST00000619086 2088 ntBASIC15.02□□□□□ -0.01
TNFRSF1BP20333 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFRSF1BP20333 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.02□□□□□ -0.01
TNFRSF1BP20333 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.02□□□□□ -0.01
TNFRSF1BP20333 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.02□□□□□ -0.01
TNFRSF1BP20333 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 AC009947.1-201ENST00000444350 727 ntBASIC15.01□□□□□ -0.01
TNFRSF1BP20333 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 AL031008.1-201ENST00000619963 541 ntBASIC15.01□□□□□ -0.01
TNFRSF1BP20333 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFRSF1BP20333 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms