Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC2P18074 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC2P18074 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ERCC2P18074 AP003680.1-201ENST00000598970 3660 ntBASIC16.59■□□□□ 0.25
ERCC2P18074 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC2P18074 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC2P18074 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC2P18074 AL139400.1-201ENST00000366220 510 ntBASIC16.59■□□□□ 0.25
ERCC2P18074 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC2P18074 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC2P18074 AL353705.2-201ENST00000428243 662 ntBASIC16.59■□□□□ 0.25
ERCC2P18074 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.59■□□□□ 0.25
ERCC2P18074 AL139010.1-201ENST00000454878 894 ntBASIC16.59■□□□□ 0.25
ERCC2P18074 HLA-J-203ENST00000494367 1087 ntBASIC16.59■□□□□ 0.25
ERCC2P18074 AC003101.2-201ENST00000612557 442 ntBASIC16.59■□□□□ 0.25
ERCC2P18074 LINC00628-201ENST00000628516 1289 ntBASIC16.59■□□□□ 0.25
ERCC2P18074 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.59■□□□□ 0.25
ERCC2P18074 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.59■□□□□ 0.25
ERCC2P18074 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.59■□□□□ 0.25
ERCC2P18074 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ERCC2P18074 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC2P18074 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ERCC2P18074 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.59■□□□□ 0.25
ERCC2P18074 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.59■□□□□ 0.25
ERCC2P18074 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC2P18074 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ERCC2P18074 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
ERCC2P18074 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC2P18074 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.59■□□□□ 0.25
ERCC2P18074 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC2P18074 BNIP3P1-202ENST00000550043 1585 ntBASIC16.59■□□□□ 0.25
ERCC2P18074 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC2P18074 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC2P18074 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.59■□□□□ 0.25
ERCC2P18074 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC2P18074 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC2P18074 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ERCC2P18074 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.25
ERCC2P18074 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ERCC2P18074 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ERCC2P18074 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ERCC2P18074 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ERCC2P18074 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.58■□□□□ 0.25
ERCC2P18074 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
ERCC2P18074 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ERCC2P18074 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ERCC2P18074 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
ERCC2P18074 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
ERCC2P18074 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.58■□□□□ 0.24
ERCC2P18074 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
ERCC2P18074 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
ERCC2P18074 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ERCC2P18074 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.58■□□□□ 0.24
ERCC2P18074 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.58■□□□□ 0.24
ERCC2P18074 AC109322.1-201ENST00000524499 1264 ntBASIC16.58■□□□□ 0.24
ERCC2P18074 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.58■□□□□ 0.24
ERCC2P18074 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
ERCC2P18074 BANF1P1-201ENST00000553684 263 ntBASIC16.58■□□□□ 0.24
ERCC2P18074 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.58■□□□□ 0.24
ERCC2P18074 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.58■□□□□ 0.24
ERCC2P18074 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 AC026979.3-201ENST00000607315 403 ntBASIC16.58■□□□□ 0.24
ERCC2P18074 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
ERCC2P18074 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.58■□□□□ 0.24
ERCC2P18074 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.58■□□□□ 0.24
ERCC2P18074 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.58■□□□□ 0.24
ERCC2P18074 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.58■□□□□ 0.24
ERCC2P18074 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 AC011477.6-201ENST00000604980 1927 ntBASIC16.58■□□□□ 0.24
ERCC2P18074 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
ERCC2P18074 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC2P18074 PRAL-201ENST00000624952 3286 ntBASIC16.57■□□□□ 0.24
ERCC2P18074 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC2P18074 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC2P18074 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ERCC2P18074 AP005117.1-202ENST00000581724 1908 ntBASIC16.57■□□□□ 0.24
ERCC2P18074 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
ERCC2P18074 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC2P18074 CYP4F24P-201ENST00000586049 1580 ntBASIC16.57■□□□□ 0.24
ERCC2P18074 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC2P18074 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC2P18074 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC2P18074 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.57■□□□□ 0.24
ERCC2P18074 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms