Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.31■□□□□ 0.04
NCK1P16333 AP000550.4-202ENST00000639755 178 ntBASIC15.31■□□□□ 0.04
NCK1P16333 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NCK1P16333 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.31■□□□□ 0.04
NCK1P16333 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.31■□□□□ 0.04
NCK1P16333 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NCK1P16333 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NCK1P16333 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.31■□□□□ 0.04
NCK1P16333 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.31■□□□□ 0.04
NCK1P16333 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.31■□□□□ 0.04
NCK1P16333 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.31■□□□□ 0.04
NCK1P16333 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCK1P16333 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCK1P16333 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCK1P16333 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCK1P16333 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
NCK1P16333 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCK1P16333 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCK1P16333 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCK1P16333 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCK1P16333 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCK1P16333 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCK1P16333 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.3■□□□□ 0.04
NCK1P16333 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCK1P16333 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCK1P16333 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCK1P16333 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NCK1P16333 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCK1P16333 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.3■□□□□ 0.04
NCK1P16333 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.3■□□□□ 0.04
NCK1P16333 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
NCK1P16333 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NCK1P16333 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.3■□□□□ 0.04
NCK1P16333 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.3■□□□□ 0.04
NCK1P16333 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCK1P16333 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.3■□□□□ 0.04
NCK1P16333 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCK1P16333 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.3■□□□□ 0.04
NCK1P16333 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.3■□□□□ 0.04
NCK1P16333 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.3■□□□□ 0.04
NCK1P16333 AC092127.1-201ENST00000567093 3455 ntBASIC15.3■□□□□ 0.04
NCK1P16333 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.3■□□□□ 0.04
NCK1P16333 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.3■□□□□ 0.04
NCK1P16333 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.3■□□□□ 0.04
NCK1P16333 AC012569.1-201ENST00000591191 1524 ntBASIC15.3■□□□□ 0.04
NCK1P16333 AC025062.2-201ENST00000605477 670 ntBASIC15.3■□□□□ 0.04
NCK1P16333 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCK1P16333 GGTLC5P-201ENST00000617623 998 ntBASIC15.3■□□□□ 0.04
NCK1P16333 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NCK1P16333 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.3■□□□□ 0.04
NCK1P16333 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
NCK1P16333 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.3■□□□□ 0.04
NCK1P16333 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NCK1P16333 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NCK1P16333 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NCK1P16333 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCK1P16333 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCK1P16333 TCAF2P1-201ENST00000291129 2421 ntBASIC15.29■□□□□ 0.04
NCK1P16333 AL161772.1-201ENST00000610494 4412 ntBASIC15.29■□□□□ 0.04
NCK1P16333 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
NCK1P16333 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.29■□□□□ 0.04
NCK1P16333 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCK1P16333 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCK1P16333 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
NCK1P16333 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
NCK1P16333 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCK1P16333 FAM45BP-202ENST00000592932 1624 ntBASIC15.29■□□□□ 0.04
NCK1P16333 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCK1P16333 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NCK1P16333 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.29■□□□□ 0.04
NCK1P16333 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCK1P16333 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.29■□□□□ 0.04
NCK1P16333 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.29■□□□□ 0.04
NCK1P16333 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCK1P16333 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCK1P16333 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
NCK1P16333 HAUS4P1-201ENST00000406739 1145 ntBASIC15.29■□□□□ 0.04
NCK1P16333 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
NCK1P16333 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.29■□□□□ 0.04
NCK1P16333 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCK1P16333 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.29■□□□□ 0.04
NCK1P16333 AC008608.2-201ENST00000606089 416 ntBASIC15.29■□□□□ 0.04
NCK1P16333 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
NCK1P16333 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NCK1P16333 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NCK1P16333 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCK1P16333 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCK1P16333 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCK1P16333 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NCK1P16333 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCK1P16333 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NCK1P16333 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
NCK1P16333 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NCK1P16333 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms