Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MTDHP5-201ENST00000598980 586 ntBASIC14.87□□□□□ -0.03
THBS1P07996 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.87□□□□□ -0.03
THBS1P07996 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.87□□□□□ -0.03
THBS1P07996 AC092902.6-201ENST00000641783 218 ntBASIC14.87□□□□□ -0.03
THBS1P07996 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
THBS1P07996 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.87□□□□□ -0.03
THBS1P07996 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
THBS1P07996 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
THBS1P07996 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.86□□□□□ -0.03
THBS1P07996 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.86□□□□□ -0.03
THBS1P07996 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
THBS1P07996 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.86□□□□□ -0.03
THBS1P07996 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.86□□□□□ -0.03
THBS1P07996 AC142381.1-201ENST00000426099 345 ntBASIC14.86□□□□□ -0.03
THBS1P07996 AP006288.1-201ENST00000446065 395 ntBASIC14.86□□□□□ -0.03
THBS1P07996 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.86□□□□□ -0.03
THBS1P07996 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.86□□□□□ -0.03
THBS1P07996 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
THBS1P07996 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.86□□□□□ -0.03
THBS1P07996 YBX1P5-201ENST00000509441 847 ntBASIC14.86□□□□□ -0.03
THBS1P07996 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.86□□□□□ -0.03
THBS1P07996 AC243562.2-201ENST00000561247 970 ntBASIC14.86□□□□□ -0.03
THBS1P07996 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.86□□□□□ -0.03
THBS1P07996 MIR3687-2-201ENST00000577708 61 ntBASIC14.86□□□□□ -0.03
THBS1P07996 MIR3687-1-201ENST00000614492 61 ntBASIC14.86□□□□□ -0.03
THBS1P07996 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
THBS1P07996 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.86□□□□□ -0.03
THBS1P07996 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
THBS1P07996 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
THBS1P07996 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
THBS1P07996 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 AC022532.1-201ENST00000624563 1728 ntBASIC14.86□□□□□ -0.03
THBS1P07996 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS1P07996 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
THBS1P07996 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
THBS1P07996 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
THBS1P07996 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.85□□□□□ -0.03
THBS1P07996 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
THBS1P07996 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
THBS1P07996 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
THBS1P07996 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
THBS1P07996 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.85□□□□□ -0.03
THBS1P07996 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.85□□□□□ -0.03
THBS1P07996 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
THBS1P07996 FAM220BP-201ENST00000377689 816 ntBASIC14.85□□□□□ -0.03
THBS1P07996 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
THBS1P07996 ACTG1P14-201ENST00000446382 1122 ntBASIC14.85□□□□□ -0.03
THBS1P07996 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.85□□□□□ -0.03
THBS1P07996 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
THBS1P07996 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.85□□□□□ -0.03
THBS1P07996 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
THBS1P07996 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.85□□□□□ -0.03
THBS1P07996 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.85□□□□□ -0.03
THBS1P07996 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.85□□□□□ -0.03
THBS1P07996 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.85□□□□□ -0.03
THBS1P07996 AC134684.3-201ENST00000641758 218 ntBASIC14.85□□□□□ -0.03
THBS1P07996 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.85□□□□□ -0.03
THBS1P07996 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
THBS1P07996 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.85□□□□□ -0.03
THBS1P07996 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
THBS1P07996 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
THBS1P07996 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
THBS1P07996 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
THBS1P07996 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
THBS1P07996 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.85□□□□□ -0.03
THBS1P07996 AC134407.2-201ENST00000625089 1978 ntBASIC14.85□□□□□ -0.03
THBS1P07996 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
THBS1P07996 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.85□□□□□ -0.03
THBS1P07996 RN7SL832P-201ENST00000607781 1756 ntBASIC14.85□□□□□ -0.03
THBS1P07996 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
THBS1P07996 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
THBS1P07996 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.85□□□□□ -0.03
THBS1P07996 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms