Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.33■□□□□ 0.21
HLA-DQB2P05538 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DQB2P05538 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 AL512356.2-201ENST00000546955 174 ntBASIC16.33■□□□□ 0.2
HLA-DQB2P05538 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 AC007967.4-201ENST00000614700 386 ntBASIC16.33■□□□□ 0.2
HLA-DQB2P05538 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQB2P05538 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 AC004987.2-201ENST00000395959 1148 ntBASIC16.32■□□□□ 0.2
HLA-DQB2P05538 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 SPDYE7P-202ENST00000420373 878 ntBASIC16.32■□□□□ 0.2
HLA-DQB2P05538 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.32■□□□□ 0.2
HLA-DQB2P05538 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 AC069262.1-201ENST00000539058 672 ntBASIC16.32■□□□□ 0.2
HLA-DQB2P05538 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DQB2P05538 AC018892.3-201ENST00000623986 2499 ntBASIC16.31■□□□□ 0.2
HLA-DQB2P05538 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.31■□□□□ 0.2
HLA-DQB2P05538 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.31■□□□□ 0.2
HLA-DQB2P05538 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms