Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.35■□□□□ 0.37
TUBB4AP04350 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TUBB4AP04350 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.35■□□□□ 0.37
TUBB4AP04350 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBB4AP04350 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBB4AP04350 AC126755.1-201ENST00000525846 6405 ntBASIC17.35■□□□□ 0.37
TUBB4AP04350 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.35■□□□□ 0.37
TUBB4AP04350 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBB4AP04350 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.35■□□□□ 0.37
TUBB4AP04350 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBB4AP04350 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBB4AP04350 AJ011931.1-201ENST00000618749 2492 ntBASIC17.35■□□□□ 0.37
TUBB4AP04350 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBB4AP04350 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBB4AP04350 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TUBB4AP04350 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBB4AP04350 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBB4AP04350 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBB4AP04350 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBB4AP04350 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TUBB4AP04350 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBB4AP04350 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TUBB4AP04350 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TUBB4AP04350 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBB4AP04350 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TUBB4AP04350 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBB4AP04350 AL645929.1-201ENST00000420084 975 ntBASIC17.34■□□□□ 0.37
TUBB4AP04350 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBB4AP04350 AC117947.1-201ENST00000427448 529 ntBASIC17.34■□□□□ 0.37
TUBB4AP04350 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TUBB4AP04350 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TUBB4AP04350 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBB4AP04350 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TUBB4AP04350 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TUBB4AP04350 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBB4AP04350 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.34■□□□□ 0.37
TUBB4AP04350 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.34■□□□□ 0.37
TUBB4AP04350 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBB4AP04350 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.34■□□□□ 0.37
TUBB4AP04350 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.34■□□□□ 0.37
TUBB4AP04350 AC005412.3-201ENST00000580309 715 ntBASIC17.34■□□□□ 0.37
TUBB4AP04350 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.34■□□□□ 0.37
TUBB4AP04350 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBB4AP04350 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBB4AP04350 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TUBB4AP04350 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.34■□□□□ 0.37
TUBB4AP04350 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TUBB4AP04350 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBB4AP04350 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBB4AP04350 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBB4AP04350 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.33■□□□□ 0.37
TUBB4AP04350 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.33■□□□□ 0.37
TUBB4AP04350 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.33■□□□□ 0.37
TUBB4AP04350 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBB4AP04350 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBB4AP04350 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.33■□□□□ 0.37
TUBB4AP04350 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBB4AP04350 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBB4AP04350 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TUBB4AP04350 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.33■□□□□ 0.36
TUBB4AP04350 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TUBB4AP04350 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBB4AP04350 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBB4AP04350 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TUBB4AP04350 RNF152P1-201ENST00000397754 604 ntBASIC17.33■□□□□ 0.36
TUBB4AP04350 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.33■□□□□ 0.36
TUBB4AP04350 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.33■□□□□ 0.36
TUBB4AP04350 KRT8P26-201ENST00000534154 1276 ntBASIC17.33■□□□□ 0.36
TUBB4AP04350 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TUBB4AP04350 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.33■□□□□ 0.36
TUBB4AP04350 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.33■□□□□ 0.36
TUBB4AP04350 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.33■□□□□ 0.36
TUBB4AP04350 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBB4AP04350 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TUBB4AP04350 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TUBB4AP04350 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBB4AP04350 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TUBB4AP04350 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TUBB4AP04350 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.33■□□□□ 0.36
TUBB4AP04350 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBB4AP04350 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TUBB4AP04350 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBB4AP04350 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TUBB4AP04350 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TUBB4AP04350 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.33■□□□□ 0.36
TUBB4AP04350 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBB4AP04350 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBB4AP04350 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
TUBB4AP04350 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TUBB4AP04350 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 AP001282.1-201ENST00000531301 1499 ntBASIC17.32■□□□□ 0.36
TUBB4AP04350 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBB4AP04350 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBB4AP04350 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms