Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MEP1AP4-201ENST00000423244 1087 ntBASIC17.59■□□□□ 0.41
VTNP04004 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.59■□□□□ 0.41
VTNP04004 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.59■□□□□ 0.41
VTNP04004 RN7SL752P-201ENST00000463779 287 ntBASIC17.59■□□□□ 0.41
VTNP04004 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.59■□□□□ 0.41
VTNP04004 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.59■□□□□ 0.41
VTNP04004 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.59■□□□□ 0.41
VTNP04004 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.59■□□□□ 0.41
VTNP04004 CTBP2P3-201ENST00000585629 1255 ntBASIC17.59■□□□□ 0.41
VTNP04004 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTNP04004 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.59■□□□□ 0.41
VTNP04004 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.59■□□□□ 0.41
VTNP04004 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
VTNP04004 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VTNP04004 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
VTNP04004 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.59■□□□□ 0.41
VTNP04004 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
VTNP04004 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VTNP04004 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.59■□□□□ 0.41
VTNP04004 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VTNP04004 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.58■□□□□ 0.41
VTNP04004 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VTNP04004 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VTNP04004 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VTNP04004 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.58■□□□□ 0.4
VTNP04004 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VTNP04004 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
VTNP04004 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
VTNP04004 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.58■□□□□ 0.4
VTNP04004 ELK1P1-201ENST00000485699 580 ntBASIC17.58■□□□□ 0.4
VTNP04004 MEIS3P1-201ENST00000495167 958 ntBASIC17.58■□□□□ 0.4
VTNP04004 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.58■□□□□ 0.4
VTNP04004 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.58■□□□□ 0.4
VTNP04004 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.58■□□□□ 0.4
VTNP04004 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
VTNP04004 AC132938.2-201ENST00000579188 680 ntBASIC17.58■□□□□ 0.4
VTNP04004 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.58■□□□□ 0.4
VTNP04004 IGHV3-72-202ENST00000621503 303 ntBASIC17.58■□□□□ 0.4
VTNP04004 AL591163.1-201ENST00000641757 987 ntBASIC17.58■□□□□ 0.4
VTNP04004 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
VTNP04004 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.58■□□□□ 0.4
VTNP04004 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
VTNP04004 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
VTNP04004 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VTNP04004 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VTNP04004 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VTNP04004 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VTNP04004 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VTNP04004 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
VTNP04004 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.58■□□□□ 0.4
VTNP04004 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VTNP04004 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VTNP04004 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.58■□□□□ 0.4
VTNP04004 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
VTNP04004 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
VTNP04004 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.58■□□□□ 0.4
VTNP04004 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.57■□□□□ 0.4
VTNP04004 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.57■□□□□ 0.4
VTNP04004 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VTNP04004 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
VTNP04004 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.57■□□□□ 0.4
VTNP04004 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VTNP04004 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VTNP04004 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VTNP04004 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VTNP04004 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
VTNP04004 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
VTNP04004 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VTNP04004 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VTNP04004 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VTNP04004 AC074338.1-201ENST00000416825 156 ntBASIC17.57■□□□□ 0.4
VTNP04004 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.57■□□□□ 0.4
VTNP04004 TARDBPP1-201ENST00000442013 1203 ntBASIC17.57■□□□□ 0.4
VTNP04004 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.57■□□□□ 0.4
VTNP04004 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.57■□□□□ 0.4
VTNP04004 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
VTNP04004 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.57■□□□□ 0.4
VTNP04004 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.57■□□□□ 0.4
VTNP04004 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VTNP04004 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.57■□□□□ 0.4
VTNP04004 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.57■□□□□ 0.4
VTNP04004 AC099568.2-201ENST00000609194 695 ntBASIC17.57■□□□□ 0.4
VTNP04004 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.57■□□□□ 0.4
VTNP04004 MIR8072-201ENST00000614241 80 ntBASIC17.57■□□□□ 0.4
VTNP04004 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VTNP04004 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
VTNP04004 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VTNP04004 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VTNP04004 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VTNP04004 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
VTNP04004 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VTNP04004 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VTNP04004 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VTNP04004 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
VTNP04004 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.57■□□□□ 0.4
VTNP04004 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTNP04004 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTNP04004 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTNP04004 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VTNP04004 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms