Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRT6AP02538 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
KRT6AP02538 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.71■□□□□ 0.1
KRT6AP02538 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6AP02538 AC008677.1-201ENST00000519230 1561 ntBASIC15.7■□□□□ 0.1
KRT6AP02538 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6AP02538 PMS2P7-201ENST00000506558 1336 ntBASIC15.7■□□□□ 0.1
KRT6AP02538 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
KRT6AP02538 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
KRT6AP02538 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6AP02538 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
KRT6AP02538 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT6AP02538 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT6AP02538 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6AP02538 PRAL-201ENST00000624952 3286 ntBASIC15.7■□□□□ 0.1
KRT6AP02538 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6AP02538 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6AP02538 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
KRT6AP02538 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6AP02538 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT6AP02538 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.7■□□□□ 0.1
KRT6AP02538 RPL13AP23-201ENST00000480739 586 ntBASIC15.7■□□□□ 0.1
KRT6AP02538 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.7■□□□□ 0.1
KRT6AP02538 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.7■□□□□ 0.1
KRT6AP02538 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT6AP02538 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT6AP02538 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.7■□□□□ 0.1
KRT6AP02538 AC068137.2-201ENST00000605408 478 ntBASIC15.7■□□□□ 0.1
KRT6AP02538 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.7■□□□□ 0.1
KRT6AP02538 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.7■□□□□ 0.1
KRT6AP02538 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6AP02538 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
KRT6AP02538 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6AP02538 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6AP02538 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6AP02538 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6AP02538 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6AP02538 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
KRT6AP02538 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
KRT6AP02538 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6AP02538 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6AP02538 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6AP02538 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6AP02538 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.7■□□□□ 0.1
KRT6AP02538 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6AP02538 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6AP02538 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT6AP02538 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT6AP02538 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6AP02538 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6AP02538 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
KRT6AP02538 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT6AP02538 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
KRT6AP02538 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6AP02538 AC002056.1-201ENST00000395613 760 ntBASIC15.69■□□□□ 0.1
KRT6AP02538 AC007967.2-201ENST00000432613 625 ntBASIC15.69■□□□□ 0.1
KRT6AP02538 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.69■□□□□ 0.1
KRT6AP02538 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
KRT6AP02538 PRYP6-201ENST00000514804 343 ntBASIC15.69■□□□□ 0.1
KRT6AP02538 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
KRT6AP02538 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.69■□□□□ 0.1
KRT6AP02538 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
KRT6AP02538 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.69■□□□□ 0.1
KRT6AP02538 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
KRT6AP02538 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.69■□□□□ 0.1
KRT6AP02538 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6AP02538 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6AP02538 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6AP02538 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6AP02538 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
KRT6AP02538 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6AP02538 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6AP02538 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT6AP02538 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6AP02538 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6AP02538 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6AP02538 AC023824.1-201ENST00000562945 2975 ntBASIC15.69■□□□□ 0.1
KRT6AP02538 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6AP02538 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6AP02538 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.68■□□□□ 0.1
KRT6AP02538 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.68■□□□□ 0.1
KRT6AP02538 AL589702.1-201ENST00000641229 1509 ntBASIC15.68■□□□□ 0.1
KRT6AP02538 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.68■□□□□ 0.1
KRT6AP02538 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6AP02538 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6AP02538 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
KRT6AP02538 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.68■□□□□ 0.1
KRT6AP02538 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6AP02538 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6AP02538 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6AP02538 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.68■□□□□ 0.1
KRT6AP02538 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6AP02538 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
KRT6AP02538 ZNF259P1-201ENST00000407656 1365 ntBASIC15.68■□□□□ 0.1
KRT6AP02538 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6AP02538 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.68■□□□□ 0.1
KRT6AP02538 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
KRT6AP02538 AC074386.1-202ENST00000463561 864 ntBASIC15.68■□□□□ 0.1
KRT6AP02538 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.68■□□□□ 0.1
KRT6AP02538 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms