Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP1P01033 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.19■□□□□ 0.34
TIMP1P01033 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.19■□□□□ 0.34
TIMP1P01033 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP1P01033 MIR1202-201ENST00000408529 83 ntBASIC17.19■□□□□ 0.34
TIMP1P01033 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
TIMP1P01033 NUS1P3-201ENST00000423502 862 ntBASIC17.19■□□□□ 0.34
TIMP1P01033 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.19■□□□□ 0.34
TIMP1P01033 EIF4HP1-201ENST00000453115 687 ntBASIC17.19■□□□□ 0.34
TIMP1P01033 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.19■□□□□ 0.34
TIMP1P01033 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP1P01033 KRT18P25-201ENST00000508931 1278 ntBASIC17.19■□□□□ 0.34
TIMP1P01033 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP1P01033 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP1P01033 HNRNPUP1-201ENST00000554987 333 ntBASIC17.19■□□□□ 0.34
TIMP1P01033 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.19■□□□□ 0.34
TIMP1P01033 EEF1DP1-201ENST00000585891 896 ntBASIC17.19■□□□□ 0.34
TIMP1P01033 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.19■□□□□ 0.34
TIMP1P01033 AL450472.2-201ENST00000603663 1156 ntBASIC17.19■□□□□ 0.34
TIMP1P01033 AC107373.2-201ENST00000607735 490 ntBASIC17.19■□□□□ 0.34
TIMP1P01033 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.19■□□□□ 0.34
TIMP1P01033 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.19■□□□□ 0.34
TIMP1P01033 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.19■□□□□ 0.34
TIMP1P01033 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.19■□□□□ 0.34
TIMP1P01033 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
TIMP1P01033 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP1P01033 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP1P01033 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP1P01033 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.19■□□□□ 0.34
TIMP1P01033 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP1P01033 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.19■□□□□ 0.34
TIMP1P01033 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIMP1P01033 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.18■□□□□ 0.34
TIMP1P01033 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TIMP1P01033 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP1P01033 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TIMP1P01033 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
TIMP1P01033 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP1P01033 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP1P01033 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP1P01033 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP1P01033 AL138709.1-201ENST00000614840 1693 ntBASIC17.18■□□□□ 0.34
TIMP1P01033 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP1P01033 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TIMP1P01033 FXNP2-201ENST00000411625 547 ntBASIC17.18■□□□□ 0.34
TIMP1P01033 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.18■□□□□ 0.34
TIMP1P01033 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.18■□□□□ 0.34
TIMP1P01033 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.18■□□□□ 0.34
TIMP1P01033 HIST2H2BC-201ENST00000498492 580 ntBASIC17.18■□□□□ 0.34
TIMP1P01033 RNA5SP486-201ENST00000515961 83 ntBASIC17.18■□□□□ 0.34
TIMP1P01033 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TIMP1P01033 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.18■□□□□ 0.34
TIMP1P01033 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.18■□□□□ 0.34
TIMP1P01033 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.18■□□□□ 0.34
TIMP1P01033 AC015910.1-201ENST00000579400 975 ntBASIC17.18■□□□□ 0.34
TIMP1P01033 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.18■□□□□ 0.34
TIMP1P01033 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.18■□□□□ 0.34
TIMP1P01033 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.18■□□□□ 0.34
TIMP1P01033 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.18■□□□□ 0.34
TIMP1P01033 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.18■□□□□ 0.34
TIMP1P01033 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.18■□□□□ 0.34
TIMP1P01033 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP1P01033 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.18■□□□□ 0.34
TIMP1P01033 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TIMP1P01033 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.18■□□□□ 0.34
TIMP1P01033 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP1P01033 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.18■□□□□ 0.34
TIMP1P01033 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TIMP1P01033 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TIMP1P01033 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TIMP1P01033 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP1P01033 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP1P01033 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TIMP1P01033 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.17■□□□□ 0.34
TIMP1P01033 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.17■□□□□ 0.34
TIMP1P01033 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP1P01033 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.17■□□□□ 0.34
TIMP1P01033 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TIMP1P01033 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP1P01033 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TIMP1P01033 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP1P01033 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP1P01033 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP1P01033 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP1P01033 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TIMP1P01033 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.17■□□□□ 0.34
TIMP1P01033 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.17■□□□□ 0.34
TIMP1P01033 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TIMP1P01033 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.17■□□□□ 0.34
TIMP1P01033 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.17■□□□□ 0.34
TIMP1P01033 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.17■□□□□ 0.34
TIMP1P01033 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.17■□□□□ 0.34
TIMP1P01033 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP1P01033 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP1P01033 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP1P01033 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.17■□□□□ 0.34
TIMP1P01033 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.17■□□□□ 0.34
TIMP1P01033 AC006453.4-201ENST00000636949 1252 ntBASIC17.17■□□□□ 0.34
TIMP1P01033 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP1P01033 AC141586.5-201ENST00000624546 2050 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms