Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.59■□□□□ 0.25
TOP3BO95985 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.59■□□□□ 0.25
TOP3BO95985 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.59■□□□□ 0.25
TOP3BO95985 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.59■□□□□ 0.25
TOP3BO95985 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TOP3BO95985 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TOP3BO95985 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TOP3BO95985 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TOP3BO95985 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.59■□□□□ 0.25
TOP3BO95985 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.59■□□□□ 0.25
TOP3BO95985 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.59■□□□□ 0.25
TOP3BO95985 AC140878.1-201ENST00000565277 250 ntBASIC16.59■□□□□ 0.25
TOP3BO95985 SPDYE22P-201ENST00000582158 798 ntBASIC16.59■□□□□ 0.25
TOP3BO95985 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TOP3BO95985 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.59■□□□□ 0.25
TOP3BO95985 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.59■□□□□ 0.25
TOP3BO95985 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.59■□□□□ 0.25
TOP3BO95985 ACTL9-202ENST00000612068 1252 ntBASIC16.59■□□□□ 0.25
TOP3BO95985 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TOP3BO95985 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TOP3BO95985 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.59■□□□□ 0.25
TOP3BO95985 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TOP3BO95985 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TOP3BO95985 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.59■□□□□ 0.25
TOP3BO95985 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TOP3BO95985 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TOP3BO95985 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TOP3BO95985 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TOP3BO95985 AC103702.1-201ENST00000548801 2630 ntBASIC16.59■□□□□ 0.25
TOP3BO95985 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.59■□□□□ 0.25
TOP3BO95985 SLC22A20-204ENST00000530038 1673 ntBASIC16.59■□□□□ 0.25
TOP3BO95985 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TOP3BO95985 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TOP3BO95985 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.59■□□□□ 0.25
TOP3BO95985 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TOP3BO95985 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TOP3BO95985 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TOP3BO95985 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.58■□□□□ 0.25
TOP3BO95985 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TOP3BO95985 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TOP3BO95985 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TOP3BO95985 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TOP3BO95985 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.58■□□□□ 0.24
TOP3BO95985 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TOP3BO95985 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TOP3BO95985 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TOP3BO95985 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TOP3BO95985 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TOP3BO95985 AC002056.1-201ENST00000395613 760 ntBASIC16.58■□□□□ 0.24
TOP3BO95985 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.58■□□□□ 0.24
TOP3BO95985 AC087163.2-201ENST00000457299 853 ntBASIC16.58■□□□□ 0.24
TOP3BO95985 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.58■□□□□ 0.24
TOP3BO95985 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TOP3BO95985 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.58■□□□□ 0.24
TOP3BO95985 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
TOP3BO95985 MPDU1-223ENST00000582151 728 ntBASIC16.58■□□□□ 0.24
TOP3BO95985 AL358472.5-202ENST00000641448 1267 ntBASIC16.58■□□□□ 0.24
TOP3BO95985 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TOP3BO95985 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.58■□□□□ 0.24
TOP3BO95985 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.58■□□□□ 0.24
TOP3BO95985 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.58■□□□□ 0.24
TOP3BO95985 AC006449.6-201ENST00000612330 2296 ntBASIC16.58■□□□□ 0.24
TOP3BO95985 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TOP3BO95985 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TOP3BO95985 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TOP3BO95985 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP3BO95985 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP3BO95985 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TOP3BO95985 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TOP3BO95985 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TOP3BO95985 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP3BO95985 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TOP3BO95985 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TOP3BO95985 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.57■□□□□ 0.24
TOP3BO95985 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP3BO95985 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.57■□□□□ 0.24
TOP3BO95985 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TOP3BO95985 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TOP3BO95985 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TOP3BO95985 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TOP3BO95985 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.57■□□□□ 0.24
TOP3BO95985 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP3BO95985 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP3BO95985 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TOP3BO95985 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.57■□□□□ 0.24
TOP3BO95985 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.57■□□□□ 0.24
TOP3BO95985 AC097493.3-201ENST00000509725 367 ntBASIC16.57■□□□□ 0.24
TOP3BO95985 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.57■□□□□ 0.24
TOP3BO95985 AC243562.1-201ENST00000560672 389 ntBASIC16.57■□□□□ 0.24
TOP3BO95985 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.57■□□□□ 0.24
TOP3BO95985 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP3BO95985 AC027307.3-201ENST00000594262 1100 ntBASIC16.57■□□□□ 0.24
TOP3BO95985 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.57■□□□□ 0.24
TOP3BO95985 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP3BO95985 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP3BO95985 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TOP3BO95985 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.57■□□□□ 0.24
TOP3BO95985 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP3BO95985 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.57■□□□□ 0.24
TOP3BO95985 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms