Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AL355306.1-201ENST00000415580 579 ntBASIC16.25■□□□□ 0.19
VAPBO95292 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.25■□□□□ 0.19
VAPBO95292 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.25■□□□□ 0.19
VAPBO95292 AL135744.1-201ENST00000565098 629 ntBASIC16.25■□□□□ 0.19
VAPBO95292 AC040169.1-201ENST00000565382 521 ntBASIC16.25■□□□□ 0.19
VAPBO95292 MIR4321-201ENST00000592276 80 ntBASIC16.25■□□□□ 0.19
VAPBO95292 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.25■□□□□ 0.19
VAPBO95292 AC092902.6-201ENST00000641783 218 ntBASIC16.25■□□□□ 0.19
VAPBO95292 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VAPBO95292 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.24■□□□□ 0.19
VAPBO95292 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VAPBO95292 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VAPBO95292 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.24■□□□□ 0.19
VAPBO95292 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VAPBO95292 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VAPBO95292 NFIC-211ENST00000641145 8399 ntBASIC16.24■□□□□ 0.19
VAPBO95292 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
VAPBO95292 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.24■□□□□ 0.19
VAPBO95292 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
VAPBO95292 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VAPBO95292 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.24■□□□□ 0.19
VAPBO95292 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.24■□□□□ 0.19
VAPBO95292 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.24■□□□□ 0.19
VAPBO95292 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
VAPBO95292 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.24■□□□□ 0.19
VAPBO95292 MIR574-201ENST00000385209 96 ntBASIC16.24■□□□□ 0.19
VAPBO95292 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.24■□□□□ 0.19
VAPBO95292 AL022342.1-201ENST00000400363 863 ntBASIC16.24■□□□□ 0.19
VAPBO95292 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.24■□□□□ 0.19
VAPBO95292 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
VAPBO95292 TFAMP1-201ENST00000412727 736 ntBASIC16.24■□□□□ 0.19
VAPBO95292 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.24■□□□□ 0.19
VAPBO95292 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.24■□□□□ 0.19
VAPBO95292 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.24■□□□□ 0.19
VAPBO95292 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
VAPBO95292 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
VAPBO95292 AC245100.5-201ENST00000452108 331 ntBASIC16.24■□□□□ 0.19
VAPBO95292 POLD2P1-201ENST00000511220 997 ntBASIC16.24■□□□□ 0.19
VAPBO95292 KRT18P58-201ENST00000527480 1120 ntBASIC16.24■□□□□ 0.19
VAPBO95292 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VAPBO95292 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
VAPBO95292 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
VAPBO95292 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
VAPBO95292 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.24■□□□□ 0.19
VAPBO95292 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.24■□□□□ 0.19
VAPBO95292 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.24■□□□□ 0.19
VAPBO95292 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VAPBO95292 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
VAPBO95292 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VAPBO95292 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.24■□□□□ 0.19
VAPBO95292 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.24■□□□□ 0.19
VAPBO95292 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.24■□□□□ 0.19
VAPBO95292 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VAPBO95292 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.24■□□□□ 0.19
VAPBO95292 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VAPBO95292 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.24■□□□□ 0.19
VAPBO95292 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VAPBO95292 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VAPBO95292 AC092850.2-201ENST00000623821 2697 ntBASIC16.23■□□□□ 0.19
VAPBO95292 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VAPBO95292 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
VAPBO95292 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VAPBO95292 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VAPBO95292 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VAPBO95292 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VAPBO95292 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VAPBO95292 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
VAPBO95292 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
VAPBO95292 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
VAPBO95292 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VAPBO95292 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VAPBO95292 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VAPBO95292 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.23■□□□□ 0.19
VAPBO95292 AC023824.1-201ENST00000562945 2975 ntBASIC16.23■□□□□ 0.19
VAPBO95292 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.23■□□□□ 0.19
VAPBO95292 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.23■□□□□ 0.19
VAPBO95292 AC073389.1-201ENST00000595595 795 ntBASIC16.23■□□□□ 0.19
VAPBO95292 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
VAPBO95292 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VAPBO95292 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VAPBO95292 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.23■□□□□ 0.19
VAPBO95292 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.23■□□□□ 0.19
VAPBO95292 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.23■□□□□ 0.19
VAPBO95292 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.23■□□□□ 0.19
VAPBO95292 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.23■□□□□ 0.19
VAPBO95292 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
VAPBO95292 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.23■□□□□ 0.19
VAPBO95292 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
VAPBO95292 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.23■□□□□ 0.19
VAPBO95292 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VAPBO95292 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
VAPBO95292 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VAPBO95292 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.22■□□□□ 0.19
VAPBO95292 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms