Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.25■□□□□ 0.03
SNX4O95219 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.25■□□□□ 0.03
SNX4O95219 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.25■□□□□ 0.03
SNX4O95219 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX4O95219 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
SNX4O95219 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX4O95219 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX4O95219 AC067930.6-201ENST00000623257 4947 ntBASIC15.25■□□□□ 0.03
SNX4O95219 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.24■□□□□ 0.03
SNX4O95219 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.24■□□□□ 0.03
SNX4O95219 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SNX4O95219 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.24■□□□□ 0.03
SNX4O95219 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.24■□□□□ 0.03
SNX4O95219 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.24■□□□□ 0.03
SNX4O95219 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.24■□□□□ 0.03
SNX4O95219 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SNX4O95219 RPS8P6-201ENST00000426177 609 ntBASIC15.24■□□□□ 0.03
SNX4O95219 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.24■□□□□ 0.03
SNX4O95219 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.24■□□□□ 0.03
SNX4O95219 DNAJB3-202ENST00000449667 1266 ntBASIC15.24■□□□□ 0.03
SNX4O95219 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SNX4O95219 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.24■□□□□ 0.03
SNX4O95219 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SNX4O95219 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.24■□□□□ 0.03
SNX4O95219 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SNX4O95219 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SNX4O95219 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.24■□□□□ 0.03
SNX4O95219 AP001160.2-201ENST00000596071 487 ntBASIC15.24■□□□□ 0.03
SNX4O95219 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.24■□□□□ 0.03
SNX4O95219 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SNX4O95219 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SNX4O95219 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.24■□□□□ 0.03
SNX4O95219 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.24■□□□□ 0.03
SNX4O95219 KRT8P39-201ENST00000396270 1433 ntBASIC15.24■□□□□ 0.03
SNX4O95219 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
SNX4O95219 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX4O95219 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.24■□□□□ 0.03
SNX4O95219 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SNX4O95219 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.24■□□□□ 0.03
SNX4O95219 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.24■□□□□ 0.03
SNX4O95219 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SNX4O95219 C8orf49-201ENST00000525043 1968 ntBASIC15.24■□□□□ 0.03
SNX4O95219 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.23■□□□□ 0.03
SNX4O95219 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.23■□□□□ 0.03
SNX4O95219 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SNX4O95219 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SNX4O95219 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.23■□□□□ 0.03
SNX4O95219 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.23■□□□□ 0.03
SNX4O95219 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.23■□□□□ 0.03
SNX4O95219 TFAMP1-201ENST00000412727 736 ntBASIC15.23■□□□□ 0.03
SNX4O95219 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.23■□□□□ 0.03
SNX4O95219 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 SPDYE11-202ENST00000450699 704 ntBASIC15.23■□□□□ 0.03
SNX4O95219 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.23■□□□□ 0.03
SNX4O95219 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.23■□□□□ 0.03
SNX4O95219 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.23■□□□□ 0.03
SNX4O95219 SPDYE9P-201ENST00000570642 692 ntBASIC15.23■□□□□ 0.03
SNX4O95219 SPDYE10P-202ENST00000612005 668 ntBASIC15.23■□□□□ 0.03
SNX4O95219 SPDYE8P-202ENST00000612377 668 ntBASIC15.23■□□□□ 0.03
SNX4O95219 AC105339.1-204ENST00000636249 355 ntBASIC15.23■□□□□ 0.03
SNX4O95219 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.23■□□□□ 0.03
SNX4O95219 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SNX4O95219 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNX4O95219 WASH6P-202ENST00000359512 1437 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms