Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC126335.2-201ENST00000623362 4637 ntBASIC14.09□□□□□ -0.15
UPK1BO75841 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
UPK1BO75841 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
UPK1BO75841 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.09□□□□□ -0.15
UPK1BO75841 FAM220CP-201ENST00000395253 831 ntBASIC14.09□□□□□ -0.15
UPK1BO75841 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 NUS1P1-201ENST00000446295 882 ntBASIC14.09□□□□□ -0.15
UPK1BO75841 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.09□□□□□ -0.15
UPK1BO75841 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
UPK1BO75841 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.09□□□□□ -0.15
UPK1BO75841 AL136038.4-201ENST00000603606 1261 ntBASIC14.09□□□□□ -0.15
UPK1BO75841 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.09□□□□□ -0.15
UPK1BO75841 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.09□□□□□ -0.15
UPK1BO75841 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
UPK1BO75841 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
UPK1BO75841 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.09□□□□□ -0.15
UPK1BO75841 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
UPK1BO75841 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
UPK1BO75841 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.09□□□□□ -0.15
UPK1BO75841 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK1BO75841 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
UPK1BO75841 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
UPK1BO75841 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UPK1BO75841 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.08□□□□□ -0.15
UPK1BO75841 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
UPK1BO75841 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UPK1BO75841 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
UPK1BO75841 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
UPK1BO75841 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1BO75841 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1BO75841 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.08□□□□□ -0.16
UPK1BO75841 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.08□□□□□ -0.16
UPK1BO75841 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.08□□□□□ -0.16
UPK1BO75841 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
UPK1BO75841 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.08□□□□□ -0.16
UPK1BO75841 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1BO75841 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.08□□□□□ -0.16
UPK1BO75841 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UPK1BO75841 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1BO75841 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.08□□□□□ -0.16
UPK1BO75841 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1BO75841 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1BO75841 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1BO75841 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UPK1BO75841 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1BO75841 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.08□□□□□ -0.16
UPK1BO75841 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UPK1BO75841 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.08□□□□□ -0.16
UPK1BO75841 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.08□□□□□ -0.16
UPK1BO75841 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.08□□□□□ -0.16
UPK1BO75841 REXO1L10P-201ENST00000615707 1290 ntBASIC14.08□□□□□ -0.16
UPK1BO75841 REXO1L12P-201ENST00000622156 912 ntBASIC14.08□□□□□ -0.16
UPK1BO75841 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1BO75841 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.08□□□□□ -0.16
UPK1BO75841 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1BO75841 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.08□□□□□ -0.16
UPK1BO75841 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1BO75841 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1BO75841 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.08□□□□□ -0.16
UPK1BO75841 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1BO75841 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1BO75841 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1BO75841 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1BO75841 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK1BO75841 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UPK1BO75841 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
UPK1BO75841 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 AC011477.6-201ENST00000604980 1927 ntBASIC14.07□□□□□ -0.16
UPK1BO75841 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
UPK1BO75841 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.07□□□□□ -0.16
UPK1BO75841 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UPK1BO75841 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UPK1BO75841 HLA-F-220ENST00000434407 884 ntBASIC14.07□□□□□ -0.16
UPK1BO75841 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.07□□□□□ -0.16
UPK1BO75841 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms