Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
USH2AO75445 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC7.04□□□□□ -1.28
USH2AO75445 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 AC007274.2-201ENST00000421675 662 ntBASIC7.04□□□□□ -1.28
USH2AO75445 NAGK-204ENST00000443872 878 ntTSL 3 BASIC7.04□□□□□ -1.28
USH2AO75445 MARK2P5-201ENST00000507649 634 ntBASIC7.04□□□□□ -1.28
USH2AO75445 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
USH2AO75445 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 AC005052.1-201ENST00000625181 2492 ntBASIC7.04□□□□□ -1.28
USH2AO75445 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC7.04□□□□□ -1.28
USH2AO75445 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC7.04□□□□□ -1.28
USH2AO75445 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 AL031731.1-201ENST00000642131 2094 ntBASIC7.04□□□□□ -1.28
USH2AO75445 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USH2AO75445 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC7.04□□□□□ -1.28
USH2AO75445 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC7.04□□□□□ -1.28
USH2AO75445 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC7.04□□□□□ -1.28
USH2AO75445 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC7.04□□□□□ -1.28
USH2AO75445 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC7.04□□□□□ -1.28
USH2AO75445 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC7.04□□□□□ -1.28
USH2AO75445 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC7.04□□□□□ -1.28
USH2AO75445 AC103988.2-201ENST00000561804 725 ntBASIC7.04□□□□□ -1.28
USH2AO75445 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC7.04□□□□□ -1.28
USH2AO75445 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC7.04□□□□□ -1.28
USH2AO75445 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
USH2AO75445 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 AC018892.3-201ENST00000623986 2499 ntBASIC7.03□□□□□ -1.28
USH2AO75445 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
USH2AO75445 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
USH2AO75445 AC018470.1-201ENST00000624790 3129 ntBASIC7.03□□□□□ -1.28
USH2AO75445 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
USH2AO75445 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 SERBP1P2-201ENST00000436888 1164 ntBASIC7.03□□□□□ -1.28
USH2AO75445 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC7.03□□□□□ -1.28
USH2AO75445 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC7.03□□□□□ -1.28
USH2AO75445 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
USH2AO75445 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC7.03□□□□□ -1.28
USH2AO75445 AC002472.4-201ENST00000641915 272 ntBASIC7.03□□□□□ -1.28
USH2AO75445 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 ZBTB45P2-201ENST00000452245 1531 ntBASIC7.03□□□□□ -1.28
USH2AO75445 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC7.03□□□□□ -1.28
USH2AO75445 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC7.03□□□□□ -1.28
USH2AO75445 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC7.03□□□□□ -1.28
USH2AO75445 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC7.03□□□□□ -1.28
USH2AO75445 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC7.03□□□□□ -1.28
USH2AO75445 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC7.03□□□□□ -1.28
USH2AO75445 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC7.03□□□□□ -1.28
USH2AO75445 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC7.03□□□□□ -1.28
USH2AO75445 AR-207ENST00000612010 3896 ntTSL 5 BASIC7.03□□□□□ -1.28
USH2AO75445 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 AC004408.2-201ENST00000623613 2777 ntBASIC7.03□□□□□ -1.28
USH2AO75445 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
USH2AO75445 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC7.03□□□□□ -1.28
USH2AO75445 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
USH2AO75445 AL354877.1-201ENST00000424412 413 ntBASIC7.03□□□□□ -1.28
USH2AO75445 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
USH2AO75445 AC234782.1-201ENST00000451950 919 ntBASIC7.03□□□□□ -1.28
USH2AO75445 POU5F1P6-201ENST00000466990 990 ntBASIC7.03□□□□□ -1.28
USH2AO75445 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC7.03□□□□□ -1.28
USH2AO75445 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC7.03□□□□□ -1.28
USH2AO75445 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC7.03□□□□□ -1.28
USH2AO75445 AC018695.6-201ENST00000614011 534 ntBASIC7.03□□□□□ -1.28
USH2AO75445 AC004923.1-202ENST00000642106 209 ntBASIC7.03□□□□□ -1.28
USH2AO75445 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC7.03□□□□□ -1.28
USH2AO75445 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC7.03□□□□□ -1.28
USH2AO75445 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
USH2AO75445 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms