Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRCH4O75427 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRCH4O75427 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.77■□□□□ 0.27
LRCH4O75427 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRCH4O75427 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.77■□□□□ 0.27
LRCH4O75427 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
LRCH4O75427 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRCH4O75427 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
LRCH4O75427 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH4O75427 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH4O75427 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LRCH4O75427 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH4O75427 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH4O75427 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH4O75427 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LRCH4O75427 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH4O75427 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LRCH4O75427 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH4O75427 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH4O75427 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LRCH4O75427 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.76■□□□□ 0.27
LRCH4O75427 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.76■□□□□ 0.27
LRCH4O75427 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
LRCH4O75427 KRT18P32-201ENST00000424695 1287 ntBASIC16.76■□□□□ 0.27
LRCH4O75427 GPS2P2-201ENST00000430745 888 ntBASIC16.76■□□□□ 0.27
LRCH4O75427 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH4O75427 AP000344.2-201ENST00000512987 629 ntBASIC16.76■□□□□ 0.27
LRCH4O75427 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH4O75427 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.76■□□□□ 0.27
LRCH4O75427 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH4O75427 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.76■□□□□ 0.27
LRCH4O75427 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.76■□□□□ 0.27
LRCH4O75427 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH4O75427 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH4O75427 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH4O75427 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LRCH4O75427 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.76■□□□□ 0.27
LRCH4O75427 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LRCH4O75427 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LRCH4O75427 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
LRCH4O75427 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH4O75427 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
LRCH4O75427 CYP4F24P-201ENST00000586049 1580 ntBASIC16.76■□□□□ 0.27
LRCH4O75427 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.76■□□□□ 0.27
LRCH4O75427 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH4O75427 CICP13-201ENST00000422015 2789 ntBASIC16.76■□□□□ 0.27
LRCH4O75427 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.76■□□□□ 0.27
LRCH4O75427 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH4O75427 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
LRCH4O75427 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LRCH4O75427 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRCH4O75427 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LRCH4O75427 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LRCH4O75427 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.75■□□□□ 0.27
LRCH4O75427 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.75■□□□□ 0.27
LRCH4O75427 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.75■□□□□ 0.27
LRCH4O75427 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.75■□□□□ 0.27
LRCH4O75427 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 AC004987.2-201ENST00000395959 1148 ntBASIC16.75■□□□□ 0.27
LRCH4O75427 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.75■□□□□ 0.27
LRCH4O75427 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.75■□□□□ 0.27
LRCH4O75427 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.75■□□□□ 0.27
LRCH4O75427 ALG1L8P-201ENST00000533887 760 ntBASIC16.75■□□□□ 0.27
LRCH4O75427 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.75■□□□□ 0.27
LRCH4O75427 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.75■□□□□ 0.27
LRCH4O75427 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.75■□□□□ 0.27
LRCH4O75427 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LRCH4O75427 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.75■□□□□ 0.27
LRCH4O75427 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LRCH4O75427 REXO1L1P-202ENST00000608646 1974 ntBASIC16.75■□□□□ 0.27
LRCH4O75427 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRCH4O75427 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.74■□□□□ 0.27
LRCH4O75427 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH4O75427 AC092850.2-201ENST00000623821 2697 ntBASIC16.74■□□□□ 0.27
LRCH4O75427 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH4O75427 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms