Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
LDB3O75112 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LDB3O75112 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LDB3O75112 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB3O75112 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.19■□□□□ 0.02
LDB3O75112 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LDB3O75112 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.19■□□□□ 0.02
LDB3O75112 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LDB3O75112 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LDB3O75112 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB3O75112 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB3O75112 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.19■□□□□ 0.02
LDB3O75112 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LDB3O75112 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.19■□□□□ 0.02
LDB3O75112 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.19■□□□□ 0.02
LDB3O75112 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB3O75112 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LDB3O75112 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB3O75112 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LDB3O75112 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LDB3O75112 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB3O75112 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LDB3O75112 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB3O75112 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LDB3O75112 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB3O75112 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.19■□□□□ 0.02
LDB3O75112 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB3O75112 AC008894.3-201ENST00000624324 3103 ntBASIC15.19■□□□□ 0.02
LDB3O75112 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.19■□□□□ 0.02
LDB3O75112 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LDB3O75112 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB3O75112 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
LDB3O75112 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LDB3O75112 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LDB3O75112 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LDB3O75112 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LDB3O75112 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB3O75112 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB3O75112 AL136982.4-201ENST00000437689 1740 ntBASIC15.18■□□□□ 0.02
LDB3O75112 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB3O75112 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB3O75112 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.18■□□□□ 0.02
LDB3O75112 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.18■□□□□ 0.02
LDB3O75112 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.18■□□□□ 0.02
LDB3O75112 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.18■□□□□ 0.02
LDB3O75112 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.18■□□□□ 0.02
LDB3O75112 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.18■□□□□ 0.02
LDB3O75112 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.18■□□□□ 0.02
LDB3O75112 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.18■□□□□ 0.02
LDB3O75112 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.18■□□□□ 0.02
LDB3O75112 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.18■□□□□ 0.02
LDB3O75112 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.18■□□□□ 0.02
LDB3O75112 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB3O75112 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.18■□□□□ 0.02
LDB3O75112 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB3O75112 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.18■□□□□ 0.02
LDB3O75112 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
LDB3O75112 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
LDB3O75112 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LDB3O75112 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB3O75112 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LDB3O75112 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB3O75112 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.18■□□□□ 0.02
LDB3O75112 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB3O75112 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB3O75112 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.18■□□□□ 0.02
LDB3O75112 AC134407.2-201ENST00000625089 1978 ntBASIC15.18■□□□□ 0.02
LDB3O75112 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB3O75112 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.18■□□□□ 0.02
LDB3O75112 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB3O75112 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB3O75112 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB3O75112 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
LDB3O75112 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB3O75112 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.17■□□□□ 0.02
LDB3O75112 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LDB3O75112 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.17■□□□□ 0.02
LDB3O75112 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LDB3O75112 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LDB3O75112 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LDB3O75112 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.17■□□□□ 0.02
LDB3O75112 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.17■□□□□ 0.02
LDB3O75112 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LDB3O75112 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LDB3O75112 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LDB3O75112 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LDB3O75112 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.17■□□□□ 0.02
LDB3O75112 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
LDB3O75112 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LDB3O75112 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LDB3O75112 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LDB3O75112 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.17■□□□□ 0.02
LDB3O75112 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.17■□□□□ 0.02
LDB3O75112 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.17■□□□□ 0.02
LDB3O75112 BANF1P1-201ENST00000553684 263 ntBASIC15.17■□□□□ 0.02
LDB3O75112 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.17■□□□□ 0.02
LDB3O75112 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.17■□□□□ 0.02
LDB3O75112 AC105021.1-202ENST00000570572 669 ntBASIC15.17■□□□□ 0.02
LDB3O75112 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.17■□□□□ 0.02
LDB3O75112 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms