Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 AZGP1P1-201ENST00000411909 902 ntBASIC16.3■□□□□ 0.2
PRAMEF11O60813 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 SERBP1P3-201ENST00000459980 809 ntBASIC16.3■□□□□ 0.2
PRAMEF11O60813 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 IGHV3-42-201ENST00000520410 361 ntBASIC16.3■□□□□ 0.2
PRAMEF11O60813 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 AC005498.2-205ENST00000593218 784 ntBASIC16.3■□□□□ 0.2
PRAMEF11O60813 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 AL590560.3-201ENST00000623350 461 ntBASIC16.3■□□□□ 0.2
PRAMEF11O60813 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.3■□□□□ 0.2
PRAMEF11O60813 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 LINC02199-201ENST00000506655 2702 ntBASIC16.3■□□□□ 0.2
PRAMEF11O60813 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 AL033527.5-202ENST00000641632 1098 ntBASIC16.29■□□□□ 0.2
PRAMEF11O60813 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF11O60813 TNRC18P3-201ENST00000441896 2691 ntBASIC16.29■□□□□ 0.2
PRAMEF11O60813 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF11O60813 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF11O60813 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF11O60813 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF11O60813 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF11O60813 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF11O60813 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF11O60813 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF11O60813 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF11O60813 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF11O60813 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PRAMEF11O60813 AC087499.5-201ENST00000452760 1342 ntBASIC16.28■□□□□ 0.2
PRAMEF11O60813 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF11O60813 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF11O60813 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF11O60813 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
PRAMEF11O60813 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF11O60813 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF11O60813 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF11O60813 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF11O60813 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PRAMEF11O60813 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PRAMEF11O60813 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF11O60813 TSSK5P-201ENST00000423978 907 ntBASIC16.28■□□□□ 0.2
PRAMEF11O60813 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.28■□□□□ 0.2
PRAMEF11O60813 AC241585.1-201ENST00000433527 519 ntBASIC16.28■□□□□ 0.2
PRAMEF11O60813 PHKG1P2-201ENST00000457537 863 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms