Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.46■□□□□ 0.39
EXTL3O43909 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.46■□□□□ 0.39
EXTL3O43909 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EXTL3O43909 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.46■□□□□ 0.39
EXTL3O43909 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.46■□□□□ 0.39
EXTL3O43909 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EXTL3O43909 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
EXTL3O43909 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
EXTL3O43909 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
EXTL3O43909 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
EXTL3O43909 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
EXTL3O43909 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
EXTL3O43909 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
EXTL3O43909 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
EXTL3O43909 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
EXTL3O43909 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.45■□□□□ 0.38
EXTL3O43909 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EXTL3O43909 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
EXTL3O43909 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.45■□□□□ 0.38
EXTL3O43909 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EXTL3O43909 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EXTL3O43909 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EXTL3O43909 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EXTL3O43909 AC092580.3-201ENST00000430932 139 ntBASIC17.45■□□□□ 0.38
EXTL3O43909 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.45■□□□□ 0.38
EXTL3O43909 AC097493.3-201ENST00000509725 367 ntBASIC17.45■□□□□ 0.38
EXTL3O43909 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.45■□□□□ 0.38
EXTL3O43909 AC239800.4-201ENST00000603712 296 ntBASIC17.45■□□□□ 0.38
EXTL3O43909 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
EXTL3O43909 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
EXTL3O43909 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
EXTL3O43909 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EXTL3O43909 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.45■□□□□ 0.38
EXTL3O43909 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
EXTL3O43909 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EXTL3O43909 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EXTL3O43909 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EXTL3O43909 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
EXTL3O43909 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.44■□□□□ 0.38
EXTL3O43909 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
EXTL3O43909 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
EXTL3O43909 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
EXTL3O43909 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.44■□□□□ 0.38
EXTL3O43909 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.44■□□□□ 0.38
EXTL3O43909 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.44■□□□□ 0.38
EXTL3O43909 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
EXTL3O43909 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.44■□□□□ 0.38
EXTL3O43909 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.44■□□□□ 0.38
EXTL3O43909 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
EXTL3O43909 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.44■□□□□ 0.38
EXTL3O43909 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.44■□□□□ 0.38
EXTL3O43909 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.44■□□□□ 0.38
EXTL3O43909 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 AL365203.3-201ENST00000609742 2057 ntBASIC17.44■□□□□ 0.38
EXTL3O43909 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
EXTL3O43909 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.44■□□□□ 0.38
EXTL3O43909 REXO1L1P-202ENST00000608646 1974 ntBASIC17.44■□□□□ 0.38
EXTL3O43909 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.44■□□□□ 0.38
EXTL3O43909 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
EXTL3O43909 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.43■□□□□ 0.38
EXTL3O43909 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EXTL3O43909 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EXTL3O43909 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
EXTL3O43909 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
EXTL3O43909 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
EXTL3O43909 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EXTL3O43909 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EXTL3O43909 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.43■□□□□ 0.38
EXTL3O43909 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EXTL3O43909 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EXTL3O43909 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
EXTL3O43909 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EXTL3O43909 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.43■□□□□ 0.38
EXTL3O43909 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.43■□□□□ 0.38
EXTL3O43909 AC027369.6-201ENST00000525520 931 ntBASIC17.43■□□□□ 0.38
EXTL3O43909 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.43■□□□□ 0.38
EXTL3O43909 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EXTL3O43909 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.43■□□□□ 0.38
EXTL3O43909 TEX28P1-201ENST00000613479 1221 ntBASIC17.43■□□□□ 0.38
EXTL3O43909 TEX28P2-201ENST00000617764 1221 ntBASIC17.43■□□□□ 0.38
EXTL3O43909 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EXTL3O43909 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms