Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.36□□□□□ -0.11
SGCEO43556 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.36□□□□□ -0.11
SGCEO43556 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.36□□□□□ -0.11
SGCEO43556 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.36□□□□□ -0.11
SGCEO43556 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SGCEO43556 AC002347.1-201ENST00000569543 541 ntBASIC14.36□□□□□ -0.11
SGCEO43556 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.36□□□□□ -0.11
SGCEO43556 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.36□□□□□ -0.11
SGCEO43556 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.36□□□□□ -0.11
SGCEO43556 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SGCEO43556 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SGCEO43556 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SGCEO43556 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 AC104581.4-201ENST00000623126 3052 ntBASIC14.35□□□□□ -0.11
SGCEO43556 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.35□□□□□ -0.11
SGCEO43556 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SGCEO43556 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.35□□□□□ -0.11
SGCEO43556 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SGCEO43556 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.35□□□□□ -0.11
SGCEO43556 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.35□□□□□ -0.11
SGCEO43556 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SGCEO43556 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.35□□□□□ -0.11
SGCEO43556 MIR574-201ENST00000385209 96 ntBASIC14.35□□□□□ -0.11
SGCEO43556 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.35□□□□□ -0.11
SGCEO43556 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.35□□□□□ -0.11
SGCEO43556 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SGCEO43556 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SGCEO43556 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.35□□□□□ -0.11
SGCEO43556 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SGCEO43556 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.35□□□□□ -0.11
SGCEO43556 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SGCEO43556 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.35□□□□□ -0.11
SGCEO43556 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SGCEO43556 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 AL592424.1-201ENST00000563624 1536 ntBASIC14.35□□□□□ -0.11
SGCEO43556 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.35□□□□□ -0.11
SGCEO43556 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SGCEO43556 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.35□□□□□ -0.11
SGCEO43556 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SGCEO43556 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SGCEO43556 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SGCEO43556 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
SGCEO43556 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SGCEO43556 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SGCEO43556 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.34□□□□□ -0.11
SGCEO43556 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SGCEO43556 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.34□□□□□ -0.11
SGCEO43556 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.34□□□□□ -0.11
SGCEO43556 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SGCEO43556 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms